Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETREG2Q8NC44 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RETREG2Q8NC44 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
RETREG2Q8NC44 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETREG2Q8NC44 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETREG2Q8NC44 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.03■□□□□ 0.96
RETREG2Q8NC44 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.03■□□□□ 0.96
RETREG2Q8NC44 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 ATP5G2P1-201ENST00000433580 426 ntBASIC21.02■□□□□ 0.96
RETREG2Q8NC44 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.02■□□□□ 0.96
RETREG2Q8NC44 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
RETREG2Q8NC44 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RETREG2Q8NC44 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETREG2Q8NC44 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 TBC1D3P2-202ENST00000577902 1649 ntBASIC21■□□□□ 0.95
RETREG2Q8NC44 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RETREG2Q8NC44 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21■□□□□ 0.95
RETREG2Q8NC44 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21■□□□□ 0.95
RETREG2Q8NC44 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RETREG2Q8NC44 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RETREG2Q8NC44 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21■□□□□ 0.95
RETREG2Q8NC44 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21■□□□□ 0.95
RETREG2Q8NC44 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21■□□□□ 0.95
RETREG2Q8NC44 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21■□□□□ 0.95
RETREG2Q8NC44 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21■□□□□ 0.95
RETREG2Q8NC44 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21■□□□□ 0.95
RETREG2Q8NC44 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21■□□□□ 0.95
RETREG2Q8NC44 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RETREG2Q8NC44 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21■□□□□ 0.95
RETREG2Q8NC44 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
RETREG2Q8NC44 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 SPDYE15P-201ENST00000424157 909 ntBASIC20.99■□□□□ 0.95
RETREG2Q8NC44 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 AC012313.10-201ENST00000623509 926 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms