Protein–RNA interactions for Protein: Q8NBN3

TMEM87A, Transmembrane protein 87A, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87AQ8NBN3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 AC112777.1-201ENST00000540175 1423 ntBASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM87AQ8NBN3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TMEM87AQ8NBN3 GNAS-203ENST00000306120 1878 ntBASIC21.52■■□□□ 1.03
TMEM87AQ8NBN3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 AC113410.3-201ENST00000623366 203 ntBASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM87AQ8NBN3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 AC010331.1-201ENST00000611423 582 ntBASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM87AQ8NBN3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 AC134043.2-201ENST00000624206 2238 ntBASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 KRT8P3-201ENST00000519669 1449 ntBASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 AC138028.4-201ENST00000564984 1845 ntBASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 AC008556.1-201ENST00000610908 2040 ntBASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.49■■□□□ 1.03
TMEM87AQ8NBN3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms