Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC093525.10-201ENST00000625130 1569 ntBASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 AC004264.1-201ENST00000608354 794 ntBASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 KRT18P16-201ENST00000510337 1294 ntBASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 AP003071.4-201ENST00000562276 1284 ntBASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCAB3Q8N7B9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
EFCAB3Q8N7B9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 AL391001.1-201ENST00000602747 715 ntBASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 KRT8P8-201ENST00000434750 1448 ntBASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCAB3Q8N7B9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCAB3Q8N7B9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms