Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 PCED1CP-201ENST00000419887 785 ntBASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC33Q8N5R6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 HOMER2P1-201ENST00000455653 964 ntBASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC33Q8N5R6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 FAM86EP-206ENST00000510506 987 ntBASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC33Q8N5R6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 AL512353.2-201ENST00000448759 1962 ntBASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms