Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 AC139887.4-201ENST00000607877 719 ntBASIC19.73■□□□□ 0.75
TTC39CQ8N584 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC39CQ8N584 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39CQ8N584 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 AK4P3-201ENST00000418260 669 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 TMPOP1-202ENST00000424642 1267 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 TSPY5P-201ENST00000426936 936 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 AC117947.1-201ENST00000427448 529 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 FAM210CP-201ENST00000445714 574 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 GCSHP2-201ENST00000560971 527 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 LINC01238-205ENST00000567549 1107 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 AC011558.1-201ENST00000623459 338 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 AL023973.1-201ENST00000624619 620 ntBASIC19.72■□□□□ 0.75
TTC39CQ8N584 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TTC39CQ8N584 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39CQ8N584 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TTC39CQ8N584 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
TTC39CQ8N584 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TTC39CQ8N584 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TTC39CQ8N584 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.71■□□□□ 0.75
TTC39CQ8N584 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TTC39CQ8N584 AC009102.3-201ENST00000623118 1491 ntBASIC19.71■□□□□ 0.75
TTC39CQ8N584 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC39CQ8N584 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TTC39CQ8N584 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC39CQ8N584 AL499627.1-201ENST00000569373 2188 ntBASIC19.7■□□□□ 0.74
TTC39CQ8N584 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC39CQ8N584 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TTC39CQ8N584 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TTC39CQ8N584 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC39CQ8N584 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC39CQ8N584 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC39CQ8N584 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC39CQ8N584 STARP1-201ENST00000397973 869 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms