Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC28Q86X40 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC28Q86X40 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC28Q86X40 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC28Q86X40 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC28Q86X40 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC28Q86X40 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC28Q86X40 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
LRRC28Q86X40 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LRRC28Q86X40 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LRRC28Q86X40 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC28Q86X40 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 SIRPAP1-201ENST00000448467 1770 ntBASIC16.54■□□□□ 0.24
LRRC28Q86X40 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 LINC00896-202ENST00000609602 2128 ntBASIC16.54■□□□□ 0.24
LRRC28Q86X40 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 KRT16P5-201ENST00000455284 522 ntBASIC16.54■□□□□ 0.24
LRRC28Q86X40 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 AC004264.1-201ENST00000608354 794 ntBASIC16.54■□□□□ 0.24
LRRC28Q86X40 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRRC28Q86X40 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC28Q86X40 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 AC012313.1-201ENST00000593393 3059 ntBASIC16.53■□□□□ 0.24
LRRC28Q86X40 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 TFP1-202ENST00000475455 1573 ntBASIC16.53■□□□□ 0.24
LRRC28Q86X40 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC28Q86X40 AL135905.2-201ENST00000584934 1404 ntBASIC16.53■□□□□ 0.24
LRRC28Q86X40 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 OR6D1P-202ENST00000641007 5290 ntBASIC16.53■□□□□ 0.24
LRRC28Q86X40 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.53■□□□□ 0.24
LRRC28Q86X40 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC28Q86X40 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC28Q86X40 AC126763.1-201ENST00000552015 2118 ntBASIC16.52■□□□□ 0.24
LRRC28Q86X40 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC28Q86X40 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC28Q86X40 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC28Q86X40 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC28Q86X40 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.52■□□□□ 0.24
LRRC28Q86X40 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms