Protein–RNA interactions for Protein: Q86US8

SMG6, Telomerase-binding protein EST1A, humanhuman

Known RBP Predictions only

Length 1,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6Q86US8 KRT126P-201ENST00000549467 1181 ntBASIC25.3■■□□□ 1.64
SMG6Q86US8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.3■■□□□ 1.64
SMG6Q86US8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC25.3■■□□□ 1.64
SMG6Q86US8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.3■■□□□ 1.64
SMG6Q86US8 AL109659.2-201ENST00000606809 1674 ntBASIC25.3■■□□□ 1.64
SMG6Q86US8 AC104581.1-202ENST00000635932 2618 ntBASIC25.3■■□□□ 1.64
SMG6Q86US8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMG6Q86US8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.3■■□□□ 1.64
SMG6Q86US8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMG6Q86US8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMG6Q86US8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMG6Q86US8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC25.3■■□□□ 1.64
SMG6Q86US8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC25.3■■□□□ 1.64
SMG6Q86US8 Z98044.1-201ENST00000632503 1764 ntBASIC25.3■■□□□ 1.64
SMG6Q86US8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMG6Q86US8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC25.3■■□□□ 1.64
SMG6Q86US8 FEM1AP3-201ENST00000403722 1741 ntBASIC25.3■■□□□ 1.64
SMG6Q86US8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMG6Q86US8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMG6Q86US8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC25.29■■□□□ 1.64
SMG6Q86US8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SMG6Q86US8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.29■■□□□ 1.64
SMG6Q86US8 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.29■■□□□ 1.64
SMG6Q86US8 SEC1P-202ENST00000473944 940 ntBASIC25.29■■□□□ 1.64
SMG6Q86US8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC25.29■■□□□ 1.64
SMG6Q86US8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
SMG6Q86US8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC25.29■■□□□ 1.64
SMG6Q86US8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SMG6Q86US8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC25.29■■□□□ 1.64
SMG6Q86US8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC25.29■■□□□ 1.64
SMG6Q86US8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC25.29■■□□□ 1.64
SMG6Q86US8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC25.29■■□□□ 1.64
SMG6Q86US8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMG6Q86US8 HBZP1-201ENST00000354915 429 ntBASIC25.29■■□□□ 1.64
SMG6Q86US8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC25.29■■□□□ 1.64
SMG6Q86US8 RASA4DP-201ENST00000460726 1199 ntBASIC25.29■■□□□ 1.64
SMG6Q86US8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.29■■□□□ 1.64
SMG6Q86US8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMG6Q86US8 RCC2P3-201ENST00000418112 1537 ntBASIC25.28■■□□□ 1.64
SMG6Q86US8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMG6Q86US8 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.28■■□□□ 1.64
SMG6Q86US8 WIZP1-201ENST00000531444 2299 ntBASIC25.28■■□□□ 1.64
SMG6Q86US8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMG6Q86US8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC25.28■■□□□ 1.64
SMG6Q86US8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
SMG6Q86US8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMG6Q86US8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMG6Q86US8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMG6Q86US8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC25.28■■□□□ 1.64
SMG6Q86US8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC25.28■■□□□ 1.64
SMG6Q86US8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC25.28■■□□□ 1.64
SMG6Q86US8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
SMG6Q86US8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
SMG6Q86US8 AL645929.1-201ENST00000420084 975 ntBASIC25.28■■□□□ 1.64
SMG6Q86US8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.28■■□□□ 1.64
SMG6Q86US8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMG6Q86US8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.28■■□□□ 1.64
SMG6Q86US8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
SMG6Q86US8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC25.28■■□□□ 1.64
SMG6Q86US8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC25.28■■□□□ 1.64
SMG6Q86US8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC25.28■■□□□ 1.64
SMG6Q86US8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.28■■□□□ 1.64
SMG6Q86US8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.27■■□□□ 1.64
SMG6Q86US8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.27■■□□□ 1.64
SMG6Q86US8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC25.27■■□□□ 1.64
SMG6Q86US8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC25.27■■□□□ 1.64
SMG6Q86US8 KRT8P32-201ENST00000512863 1461 ntBASIC25.27■■□□□ 1.64
SMG6Q86US8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC25.27■■□□□ 1.64
SMG6Q86US8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC25.27■■□□□ 1.64
SMG6Q86US8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMG6Q86US8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC25.27■■□□□ 1.64
SMG6Q86US8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMG6Q86US8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SMG6Q86US8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms