Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 AL162741.1-201ENST00000565563 1558 ntBASIC16.81■□□□□ 0.28
SHFQ7M4L6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 MTMR9LP-203ENST00000426597 1545 ntBASIC16.81■□□□□ 0.28
SHFQ7M4L6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 AC090192.1-201ENST00000517740 490 ntBASIC16.81■□□□□ 0.28
SHFQ7M4L6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHFQ7M4L6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SHFQ7M4L6 RCC2P6-201ENST00000526625 1557 ntBASIC16.81■□□□□ 0.28
SHFQ7M4L6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 ESPNP-201ENST00000270691 2015 ntBASIC16.8■□□□□ 0.28
SHFQ7M4L6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 AL355802.2-201ENST00000402069 882 ntBASIC16.8■□□□□ 0.28
SHFQ7M4L6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 AP003097.1-201ENST00000530657 1135 ntBASIC16.8■□□□□ 0.28
SHFQ7M4L6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 AC008403.3-201ENST00000598924 454 ntBASIC16.8■□□□□ 0.28
SHFQ7M4L6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.8■□□□□ 0.28
SHFQ7M4L6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHFQ7M4L6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.8■□□□□ 0.28
SHFQ7M4L6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 MTDHP1-201ENST00000605323 784 ntBASIC16.79■□□□□ 0.28
SHFQ7M4L6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms