Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SLC25A1P2-201ENST00000430693 912 ntBASIC21.52■■□□□ 1.04
KRT40Q6A162 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.52■■□□□ 1.04
KRT40Q6A162 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.52■■□□□ 1.04
KRT40Q6A162 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.52■■□□□ 1.04
KRT40Q6A162 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
KRT40Q6A162 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
KRT40Q6A162 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KRT40Q6A162 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
KRT40Q6A162 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.52■■□□□ 1.04
KRT40Q6A162 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KRT40Q6A162 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRT40Q6A162 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
KRT40Q6A162 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KRT40Q6A162 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
KRT40Q6A162 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.51■■□□□ 1.03
KRT40Q6A162 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.51■■□□□ 1.03
KRT40Q6A162 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT40Q6A162 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
KRT40Q6A162 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KRT40Q6A162 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
KRT40Q6A162 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.51■■□□□ 1.03
KRT40Q6A162 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT40Q6A162 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
KRT40Q6A162 AP003041.3-201ENST00000527151 707 ntBASIC21.51■■□□□ 1.03
KRT40Q6A162 AL353719.1-201ENST00000566847 864 ntBASIC21.51■■□□□ 1.03
KRT40Q6A162 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.51■■□□□ 1.03
KRT40Q6A162 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT40Q6A162 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
KRT40Q6A162 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.51■■□□□ 1.03
KRT40Q6A162 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
KRT40Q6A162 AC112777.1-201ENST00000540175 1423 ntBASIC21.51■■□□□ 1.03
KRT40Q6A162 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT40Q6A162 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT40Q6A162 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.5■■□□□ 1.03
KRT40Q6A162 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
KRT40Q6A162 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.5■■□□□ 1.03
KRT40Q6A162 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 AC092338.2-201ENST00000568827 1415 ntBASIC21.5■■□□□ 1.03
KRT40Q6A162 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.5■■□□□ 1.03
KRT40Q6A162 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.5■■□□□ 1.03
KRT40Q6A162 TPM4P1-201ENST00000436100 807 ntBASIC21.5■■□□□ 1.03
KRT40Q6A162 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.5■■□□□ 1.03
KRT40Q6A162 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.5■■□□□ 1.03
KRT40Q6A162 AL358472.4-201ENST00000633140 710 ntBASIC21.5■■□□□ 1.03
KRT40Q6A162 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.5■■□□□ 1.03
KRT40Q6A162 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.5■■□□□ 1.03
KRT40Q6A162 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.5■■□□□ 1.03
KRT40Q6A162 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT40Q6A162 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KRT40Q6A162 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KRT40Q6A162 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT40Q6A162 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT40Q6A162 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.49■■□□□ 1.03
KRT40Q6A162 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.49■■□□□ 1.03
KRT40Q6A162 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.49■■□□□ 1.03
KRT40Q6A162 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT40Q6A162 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT40Q6A162 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT40Q6A162 TSPY17P-201ENST00000450329 467 ntBASIC21.49■■□□□ 1.03
KRT40Q6A162 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.49■■□□□ 1.03
KRT40Q6A162 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT40Q6A162 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT40Q6A162 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT40Q6A162 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT40Q6A162 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT40Q6A162 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.49■■□□□ 1.03
KRT40Q6A162 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT40Q6A162 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT40Q6A162 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT40Q6A162 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.48■■□□□ 1.03
KRT40Q6A162 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT40Q6A162 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT40Q6A162 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
KRT40Q6A162 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT40Q6A162 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT40Q6A162 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT40Q6A162 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT40Q6A162 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
KRT40Q6A162 KRT18P41-201ENST00000518924 1277 ntBASIC21.48■■□□□ 1.03
KRT40Q6A162 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT40Q6A162 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms