Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CERKLQ49MI3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CERKLQ49MI3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.72■■□□□ 1.07
CERKLQ49MI3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 IGHGP-201ENST00000390555 1178 ntBASIC21.71■■□□□ 1.07
CERKLQ49MI3 LINC00265-3P-201ENST00000447588 903 ntBASIC21.71■■□□□ 1.07
CERKLQ49MI3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 AC090616.6-201ENST00000582640 721 ntBASIC21.71■■□□□ 1.07
CERKLQ49MI3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.71■■□□□ 1.07
CERKLQ49MI3 AC116562.4-201ENST00000641316 2276 ntBASIC21.71■■□□□ 1.07
CERKLQ49MI3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CERKLQ49MI3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CERKLQ49MI3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CERKLQ49MI3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.7■■□□□ 1.07
CERKLQ49MI3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 IGHV3-41-201ENST00000613121 348 ntBASIC21.7■■□□□ 1.06
CERKLQ49MI3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CERKLQ49MI3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.7■■□□□ 1.06
CERKLQ49MI3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CERKLQ49MI3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.69■■□□□ 1.06
CERKLQ49MI3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.69■■□□□ 1.06
CERKLQ49MI3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.69■■□□□ 1.06
CERKLQ49MI3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 NUS1P1-201ENST00000446295 882 ntBASIC21.69■■□□□ 1.06
CERKLQ49MI3 AP000867.3-201ENST00000524675 377 ntBASIC21.69■■□□□ 1.06
CERKLQ49MI3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.69■■□□□ 1.06
CERKLQ49MI3 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.69■■□□□ 1.06
CERKLQ49MI3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CERKLQ49MI3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.69■■□□□ 1.06
CERKLQ49MI3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CERKLQ49MI3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 AC026396.1-201ENST00000419388 421 ntBASIC21.68■■□□□ 1.06
CERKLQ49MI3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.68■■□□□ 1.06
CERKLQ49MI3 TOB2P1-201ENST00000469761 992 ntBASIC21.68■■□□□ 1.06
CERKLQ49MI3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
CERKLQ49MI3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CERKLQ49MI3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.68■■□□□ 1.06
CERKLQ49MI3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CERKLQ49MI3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CERKLQ49MI3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms