Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX4Q33E94 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX4Q33E94 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RFX4Q33E94 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX4Q33E94 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX4Q33E94 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX4Q33E94 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RFX4Q33E94 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.29■□□□□ 0.36
RFX4Q33E94 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX4Q33E94 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.29■□□□□ 0.36
RFX4Q33E94 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.29■□□□□ 0.36
RFX4Q33E94 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.29■□□□□ 0.36
RFX4Q33E94 AL138781.1-201ENST00000566567 1274 ntBASIC17.29■□□□□ 0.36
RFX4Q33E94 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.29■□□□□ 0.36
RFX4Q33E94 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX4Q33E94 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX4Q33E94 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RFX4Q33E94 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX4Q33E94 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX4Q33E94 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.28■□□□□ 0.36
RFX4Q33E94 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX4Q33E94 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RFX4Q33E94 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX4Q33E94 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX4Q33E94 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX4Q33E94 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX4Q33E94 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX4Q33E94 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX4Q33E94 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX4Q33E94 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.28■□□□□ 0.36
RFX4Q33E94 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX4Q33E94 AC092666.2-201ENST00000613287 246 ntBASIC17.28■□□□□ 0.36
RFX4Q33E94 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RFX4Q33E94 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX4Q33E94 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RFX4Q33E94 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RFX4Q33E94 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX4Q33E94 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RFX4Q33E94 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX4Q33E94 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
RFX4Q33E94 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX4Q33E94 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RFX4Q33E94 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RFX4Q33E94 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RFX4Q33E94 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.27■□□□□ 0.36
RFX4Q33E94 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms