Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC138894.3-201ENST00000603787 634 ntBASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 AC233702.3-201ENST00000578656 1387 ntBASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 MIR3180-4-201ENST00000582223 153 ntBASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 AC024563.2-201ENST00000603282 481 ntBASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 AL592071.1-201ENST00000611956 408 ntBASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 AL031008.1-201ENST00000619963 541 ntBASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SHROOM1Q2M3G4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SHROOM1Q2M3G4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SHROOM1Q2M3G4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.64■■□□□ 1.06
SHROOM1Q2M3G4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.64■■□□□ 1.06
SHROOM1Q2M3G4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 RN7SL606P-201ENST00000472779 293 ntBASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 AC074051.2-201ENST00000565115 352 ntBASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 IGHV3-41-201ENST00000613121 348 ntBASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM1Q2M3G4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 AC012615.1-201ENST00000565797 1299 ntBASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM1Q2M3G4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 AL163051.1-201ENST00000569214 1512 ntBASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 KRT18P31-201ENST00000506277 1292 ntBASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 AC104692.2-201ENST00000603054 253 ntBASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 AC124864.1-201ENST00000623408 392 ntBASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM1Q2M3G4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.61■■□□□ 1.05
SHROOM1Q2M3G4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM1Q2M3G4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM1Q2M3G4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.61■■□□□ 1.05
SHROOM1Q2M3G4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM1Q2M3G4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM1Q2M3G4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms