Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
IRX3P78415 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.58■■□□□ 1.04
IRX3P78415 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IRX3P78415 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IRX3P78415 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IRX3P78415 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.58■■□□□ 1.04
IRX3P78415 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
IRX3P78415 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
IRX3P78415 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
IRX3P78415 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IRX3P78415 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
IRX3P78415 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
IRX3P78415 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.57■■□□□ 1.04
IRX3P78415 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
IRX3P78415 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
IRX3P78415 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.57■■□□□ 1.04
IRX3P78415 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
IRX3P78415 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 MIR564-202ENST00000385049 94 ntBASIC21.57■■□□□ 1.04
IRX3P78415 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.57■■□□□ 1.04
IRX3P78415 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.57■■□□□ 1.04
IRX3P78415 AC090616.6-201ENST00000582640 721 ntBASIC21.57■■□□□ 1.04
IRX3P78415 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
IRX3P78415 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
IRX3P78415 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
IRX3P78415 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IRX3P78415 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.56■■□□□ 1.04
IRX3P78415 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.56■■□□□ 1.04
IRX3P78415 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.56■■□□□ 1.04
IRX3P78415 AC104819.1-201ENST00000504587 486 ntBASIC21.56■■□□□ 1.04
IRX3P78415 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 IGHV3-41-201ENST00000613121 348 ntBASIC21.56■■□□□ 1.04
IRX3P78415 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
IRX3P78415 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
IRX3P78415 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.56■■□□□ 1.04
IRX3P78415 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX3P78415 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.56■■□□□ 1.04
IRX3P78415 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX3P78415 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
IRX3P78415 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX3P78415 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX3P78415 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX3P78415 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.55■■□□□ 1.04
IRX3P78415 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.55■■□□□ 1.04
IRX3P78415 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 PVRIG2P-201ENST00000435460 978 ntBASIC21.55■■□□□ 1.04
IRX3P78415 AC009078.2-202ENST00000463353 338 ntBASIC21.55■■□□□ 1.04
IRX3P78415 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.55■■□□□ 1.04
IRX3P78415 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IRX3P78415 KRT18P31-201ENST00000506277 1292 ntBASIC21.55■■□□□ 1.04
IRX3P78415 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.55■■□□□ 1.04
IRX3P78415 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IRX3P78415 AL031008.1-201ENST00000619963 541 ntBASIC21.55■■□□□ 1.04
IRX3P78415 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.55■■□□□ 1.04
IRX3P78415 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
IRX3P78415 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX3P78415 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.55■■□□□ 1.04
IRX3P78415 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.55■■□□□ 1.04
IRX3P78415 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX3P78415 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
IRX3P78415 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.54■■□□□ 1.04
IRX3P78415 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.54■■□□□ 1.04
IRX3P78415 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.54■■□□□ 1.04
IRX3P78415 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.54■■□□□ 1.04
IRX3P78415 AL390719.2-201ENST00000606993 987 ntBASIC21.54■■□□□ 1.04
IRX3P78415 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms