Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.32■□□□□ 0.68
IRX4P78413 MFAP1P1-201ENST00000442257 1255 ntBASIC19.32■□□□□ 0.68
IRX4P78413 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.32■□□□□ 0.68
IRX4P78413 FAM86EP-206ENST00000510506 987 ntBASIC19.32■□□□□ 0.68
IRX4P78413 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.32■□□□□ 0.68
IRX4P78413 AC011558.1-201ENST00000623459 338 ntBASIC19.32■□□□□ 0.68
IRX4P78413 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.32■□□□□ 0.68
IRX4P78413 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
IRX4P78413 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
IRX4P78413 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX4P78413 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
IRX4P78413 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX4P78413 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
IRX4P78413 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX4P78413 CROCCP3-202ENST00000420820 1947 ntBASIC19.31■□□□□ 0.68
IRX4P78413 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.31■□□□□ 0.68
IRX4P78413 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.31■□□□□ 0.68
IRX4P78413 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
IRX4P78413 TEX21P-204ENST00000641479 1693 ntBASIC19.31■□□□□ 0.68
IRX4P78413 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.31■□□□□ 0.68
IRX4P78413 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
IRX4P78413 AC007663.1-201ENST00000438948 1240 ntBASIC19.31■□□□□ 0.68
IRX4P78413 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX4P78413 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
IRX4P78413 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.31■□□□□ 0.68
IRX4P78413 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.31■□□□□ 0.68
IRX4P78413 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX4P78413 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX4P78413 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.31■□□□□ 0.68
IRX4P78413 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX4P78413 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
IRX4P78413 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.31■□□□□ 0.68
IRX4P78413 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX4P78413 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
IRX4P78413 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.3■□□□□ 0.68
IRX4P78413 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.3■□□□□ 0.68
IRX4P78413 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.3■□□□□ 0.68
IRX4P78413 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.3■□□□□ 0.68
IRX4P78413 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 AC004951.3-201ENST00000418645 1148 ntBASIC19.3■□□□□ 0.68
IRX4P78413 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IRX4P78413 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.3■□□□□ 0.68
IRX4P78413 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.3■□□□□ 0.68
IRX4P78413 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
IRX4P78413 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.3■□□□□ 0.68
IRX4P78413 AC093458.2-201ENST00000623150 629 ntBASIC19.3■□□□□ 0.68
IRX4P78413 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.3■□□□□ 0.68
IRX4P78413 AC141257.4-201ENST00000634557 245 ntBASIC19.3■□□□□ 0.68
IRX4P78413 AC136944.6-201ENST00000634818 245 ntBASIC19.3■□□□□ 0.68
IRX4P78413 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.3■□□□□ 0.68
IRX4P78413 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
IRX4P78413 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
IRX4P78413 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.3■□□□□ 0.68
IRX4P78413 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 AC005082.1-201ENST00000413042 2259 ntBASIC19.3■□□□□ 0.68
IRX4P78413 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX4P78413 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
IRX4P78413 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
IRX4P78413 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX4P78413 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.29■□□□□ 0.68
IRX4P78413 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX4P78413 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX4P78413 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX4P78413 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
IRX4P78413 AC026396.1-201ENST00000419388 421 ntBASIC19.29■□□□□ 0.68
IRX4P78413 SLC25A1P2-201ENST00000430693 912 ntBASIC19.29■□□□□ 0.68
IRX4P78413 DUSP5P1-201ENST00000441325 1139 ntBASIC19.29■□□□□ 0.68
IRX4P78413 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
IRX4P78413 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.29■□□□□ 0.68
IRX4P78413 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX4P78413 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
IRX4P78413 AC010653.2-201ENST00000623505 997 ntBASIC19.29■□□□□ 0.68
IRX4P78413 AL121956.5-201ENST00000625261 221 ntBASIC19.29■□□□□ 0.68
IRX4P78413 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX4P78413 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
IRX4P78413 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX4P78413 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX4P78413 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX4P78413 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.29■□□□□ 0.68
IRX4P78413 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX4P78413 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX4P78413 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
IRX4P78413 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
IRX4P78413 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms