Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 COX11P1-201ENST00000489116 835 ntBASIC20.19■□□□□ 0.82
SNRPFP62306 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNRPFP62306 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.19■□□□□ 0.82
SNRPFP62306 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SNRPFP62306 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.18■□□□□ 0.82
SNRPFP62306 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SNRPFP62306 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRPFP62306 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SNRPFP62306 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SNRPFP62306 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SNRPFP62306 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.18■□□□□ 0.82
SNRPFP62306 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRPFP62306 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SNRPFP62306 MIR3917-201ENST00000580971 93 ntBASIC20.18■□□□□ 0.82
SNRPFP62306 AC024243.1-201ENST00000609234 778 ntBASIC20.18■□□□□ 0.82
SNRPFP62306 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SNRPFP62306 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SNRPFP62306 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRPFP62306 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRPFP62306 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SNRPFP62306 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.17■□□□□ 0.82
SNRPFP62306 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SNRPFP62306 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SNRPFP62306 AC005521.1-201ENST00000393351 872 ntBASIC20.17■□□□□ 0.82
SNRPFP62306 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.17■□□□□ 0.82
SNRPFP62306 AC140113.3-201ENST00000605663 199 ntBASIC20.17■□□□□ 0.82
SNRPFP62306 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.17■□□□□ 0.82
SNRPFP62306 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SNRPFP62306 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SNRPFP62306 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SNRPFP62306 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNRPFP62306 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SNRPFP62306 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SNRPFP62306 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SNRPFP62306 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.16■□□□□ 0.82
SNRPFP62306 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.16■□□□□ 0.82
SNRPFP62306 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.16■□□□□ 0.82
SNRPFP62306 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SNRPFP62306 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.16■□□□□ 0.82
SNRPFP62306 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.16■□□□□ 0.82
SNRPFP62306 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SNRPFP62306 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.16■□□□□ 0.82
SNRPFP62306 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.16■□□□□ 0.82
SNRPFP62306 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SNRPFP62306 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SNRPFP62306 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.16■□□□□ 0.82
SNRPFP62306 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.16■□□□□ 0.82
SNRPFP62306 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SNRPFP62306 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
SNRPFP62306 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.16■□□□□ 0.82
SNRPFP62306 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.16■□□□□ 0.82
SNRPFP62306 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRPFP62306 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 SDHAP2-201ENST00000455183 2001 ntBASIC20.15■□□□□ 0.82
SNRPFP62306 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRPFP62306 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms