Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN8P56748 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.69■□□□□ 0.42
CLDN8P56748 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CLDN8P56748 AC096733.2-201ENST00000609937 1394 ntBASIC17.68■□□□□ 0.42
CLDN8P56748 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN8P56748 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLDN8P56748 MIR564-202ENST00000385049 94 ntBASIC17.68■□□□□ 0.42
CLDN8P56748 FAM197Y1-201ENST00000421178 764 ntBASIC17.68■□□□□ 0.42
CLDN8P56748 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN8P56748 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN8P56748 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN8P56748 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN8P56748 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN8P56748 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN8P56748 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN8P56748 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN8P56748 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN8P56748 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN8P56748 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN8P56748 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN8P56748 AL135905.2-201ENST00000584934 1404 ntBASIC17.67■□□□□ 0.42
CLDN8P56748 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN8P56748 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLDN8P56748 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN8P56748 AP000593.1-201ENST00000393668 712 ntBASIC17.67■□□□□ 0.42
CLDN8P56748 AL023284.2-201ENST00000405850 579 ntBASIC17.67■□□□□ 0.42
CLDN8P56748 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN8P56748 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN8P56748 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN8P56748 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN8P56748 FAM197Y4-202ENST00000622692 608 ntBASIC17.67■□□□□ 0.42
CLDN8P56748 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN8P56748 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN8P56748 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN8P56748 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN8P56748 ESPNP-201ENST00000270691 2015 ntBASIC17.67■□□□□ 0.42
CLDN8P56748 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.67■□□□□ 0.42
CLDN8P56748 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN8P56748 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN8P56748 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN8P56748 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN8P56748 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN8P56748 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN8P56748 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN8P56748 CD177P1-201ENST00000606252 935 ntBASIC17.66■□□□□ 0.42
CLDN8P56748 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN8P56748 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN8P56748 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN8P56748 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN8P56748 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN8P56748 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN8P56748 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN8P56748 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN8P56748 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN8P56748 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms