Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH13P55290 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH13P55290 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDH13P55290 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH13P55290 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH13P55290 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 B3GAT3P1-201ENST00000471720 806 ntBASIC18.19■□□□□ 0.5
CDH13P55290 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CDH13P55290 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH13P55290 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH13P55290 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 MIR6786-201ENST00000616843 113 ntBASIC18.19■□□□□ 0.5
CDH13P55290 FAM197Y4-202ENST00000622692 608 ntBASIC18.19■□□□□ 0.5
CDH13P55290 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH13P55290 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDH13P55290 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH13P55290 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH13P55290 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH13P55290 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH13P55290 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH13P55290 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
CDH13P55290 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH13P55290 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDH13P55290 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH13P55290 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.18■□□□□ 0.5
CDH13P55290 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.18■□□□□ 0.5
CDH13P55290 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDH13P55290 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH13P55290 AC067852.2-201ENST00000590513 2313 ntBASIC18.18■□□□□ 0.5
CDH13P55290 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH13P55290 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH13P55290 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 AL162741.1-201ENST00000565563 1558 ntBASIC18.17■□□□□ 0.5
CDH13P55290 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 AC112777.1-201ENST00000540175 1423 ntBASIC18.17■□□□□ 0.5
CDH13P55290 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH13P55290 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH13P55290 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 MESTP1-201ENST00000404287 994 ntBASIC18.17■□□□□ 0.5
CDH13P55290 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDH13P55290 FAM197Y1-201ENST00000421178 764 ntBASIC18.17■□□□□ 0.5
CDH13P55290 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH13P55290 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDH13P55290 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH13P55290 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CDH13P55290 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 AC008556.1-201ENST00000610908 2040 ntBASIC18.16■□□□□ 0.5
CDH13P55290 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 KRT8P45-201ENST00000414328 1447 ntBASIC18.16■□□□□ 0.5
CDH13P55290 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms