Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL163051.1-201ENST00000569214 1512 ntBASIC18.99■□□□□ 0.63
CDH4P55283 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH4P55283 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH4P55283 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH4P55283 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH4P55283 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH4P55283 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH4P55283 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH4P55283 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDH4P55283 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH4P55283 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.98■□□□□ 0.63
CDH4P55283 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH4P55283 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CDH4P55283 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH4P55283 AL499627.1-201ENST00000569373 2188 ntBASIC18.98■□□□□ 0.63
CDH4P55283 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 AC098818.2-201ENST00000564925 2320 ntBASIC18.97■□□□□ 0.63
CDH4P55283 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDH4P55283 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDH4P55283 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDH4P55283 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH4P55283 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH4P55283 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH4P55283 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.97■□□□□ 0.63
CDH4P55283 LINC01311-201ENST00000565162 1445 ntBASIC18.97■□□□□ 0.63
CDH4P55283 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
CDH4P55283 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH4P55283 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH4P55283 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH4P55283 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH4P55283 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDH4P55283 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDH4P55283 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 HBZP1-201ENST00000354915 429 ntBASIC18.96■□□□□ 0.63
CDH4P55283 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH4P55283 AC092597.1-201ENST00000487352 616 ntBASIC18.96■□□□□ 0.63
CDH4P55283 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.96■□□□□ 0.63
CDH4P55283 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH4P55283 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.96■□□□□ 0.63
CDH4P55283 AC083849.1-201ENST00000615227 514 ntBASIC18.96■□□□□ 0.63
CDH4P55283 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH4P55283 AC079602.3-201ENST00000623931 403 ntBASIC18.96■□□□□ 0.63
CDH4P55283 AL121956.5-201ENST00000625261 221 ntBASIC18.96■□□□□ 0.63
CDH4P55283 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDH4P55283 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH4P55283 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDH4P55283 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDH4P55283 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDH4P55283 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDH4P55283 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 PVRIG2P-201ENST00000435460 978 ntBASIC18.95■□□□□ 0.62
CDH4P55283 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH4P55283 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH4P55283 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH4P55283 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH4P55283 ZNF444P1-201ENST00000559497 298 ntBASIC18.95■□□□□ 0.62
CDH4P55283 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CDH4P55283 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH4P55283 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH4P55283 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDH4P55283 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDH4P55283 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH4P55283 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDH4P55283 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH4P55283 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH4P55283 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms