Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCKAP1LP55160 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.33■□□□□ 0.84
NCKAP1LP55160 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NCKAP1LP55160 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCKAP1LP55160 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NCKAP1LP55160 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.32■□□□□ 0.84
NCKAP1LP55160 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.32■□□□□ 0.84
NCKAP1LP55160 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.32■□□□□ 0.84
NCKAP1LP55160 AL049597.2-201ENST00000565575 961 ntBASIC20.32■□□□□ 0.84
NCKAP1LP55160 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.32■□□□□ 0.84
NCKAP1LP55160 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
NCKAP1LP55160 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NCKAP1LP55160 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.32■□□□□ 0.84
NCKAP1LP55160 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1LP55160 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 MIR149-201ENST00000384879 89 ntBASIC20.31■□□□□ 0.84
NCKAP1LP55160 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 AL359075.1-203ENST00000462729 1002 ntBASIC20.31■□□□□ 0.84
NCKAP1LP55160 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKAP1LP55160 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1LP55160 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 AC009065.1-201ENST00000564055 1225 ntBASIC20.3■□□□□ 0.84
NCKAP1LP55160 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.3■□□□□ 0.84
NCKAP1LP55160 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1LP55160 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKAP1LP55160 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKAP1LP55160 AC005082.1-201ENST00000413042 2259 ntBASIC20.29■□□□□ 0.84
NCKAP1LP55160 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKAP1LP55160 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
NCKAP1LP55160 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NCKAP1LP55160 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKAP1LP55160 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NCKAP1LP55160 AC092647.4-201ENST00000457211 535 ntBASIC20.29■□□□□ 0.84
NCKAP1LP55160 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKAP1LP55160 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms