Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 MIR3180-5-201ENST00000583743 153 ntBASIC19.46■□□□□ 0.71
HADHBP55084 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHBP55084 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HADHBP55084 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHBP55084 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHBP55084 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.46■□□□□ 0.71
HADHBP55084 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HADHBP55084 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHBP55084 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHBP55084 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHBP55084 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.45■□□□□ 0.7
HADHBP55084 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 AP000997.3-201ENST00000623333 2250 ntBASIC19.45■□□□□ 0.7
HADHBP55084 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.45■□□□□ 0.7
HADHBP55084 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 SLC25A1P4-201ENST00000567977 778 ntBASIC19.45■□□□□ 0.7
HADHBP55084 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HADHBP55084 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
HADHBP55084 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 GNAS-203ENST00000306120 1878 ntBASIC19.45■□□□□ 0.7
HADHBP55084 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HADHBP55084 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.45■□□□□ 0.7
HADHBP55084 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHBP55084 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.45■□□□□ 0.7
HADHBP55084 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.45■□□□□ 0.7
HADHBP55084 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.45■□□□□ 0.7
HADHBP55084 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HADHBP55084 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 HOXB1-202ENST00000577092 1414 ntBASIC19.44■□□□□ 0.7
HADHBP55084 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HADHBP55084 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HADHBP55084 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.44■□□□□ 0.7
HADHBP55084 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HADHBP55084 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.44■□□□□ 0.7
HADHBP55084 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
HADHBP55084 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.44■□□□□ 0.7
HADHBP55084 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 AC036111.1-201ENST00000533973 1582 ntBASIC19.44■□□□□ 0.7
HADHBP55084 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHBP55084 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.43■□□□□ 0.7
HADHBP55084 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 AL096828.2-201ENST00000567259 1965 ntBASIC19.43■□□□□ 0.7
HADHBP55084 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 PHGDH-209ENST00000641074 1780 ntBASIC19.43■□□□□ 0.7
HADHBP55084 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 AC097488.1-201ENST00000507834 756 ntBASIC19.43■□□□□ 0.7
HADHBP55084 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.43■□□□□ 0.7
HADHBP55084 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 MIR4674-201ENST00000582457 87 ntBASIC19.43■□□□□ 0.7
HADHBP55084 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.43■□□□□ 0.7
HADHBP55084 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.43■□□□□ 0.7
HADHBP55084 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.43■□□□□ 0.7
HADHBP55084 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
HADHBP55084 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHBP55084 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.43■□□□□ 0.7
HADHBP55084 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.43■□□□□ 0.7
HADHBP55084 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.42■□□□□ 0.7
HADHBP55084 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.42■□□□□ 0.7
HADHBP55084 SDHAP2-201ENST00000455183 2001 ntBASIC19.42■□□□□ 0.7
HADHBP55084 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHBP55084 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HADHBP55084 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HADHBP55084 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms