Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDE1AP54750 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PDE1AP54750 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PDE1AP54750 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 LINC01568-207ENST00000641790 1380 ntBASIC22.68■■□□□ 1.22
PDE1AP54750 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
PDE1AP54750 KRT18P23-201ENST00000435622 1283 ntBASIC22.68■■□□□ 1.22
PDE1AP54750 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.68■■□□□ 1.22
PDE1AP54750 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.68■■□□□ 1.22
PDE1AP54750 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.68■■□□□ 1.22
PDE1AP54750 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDE1AP54750 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.68■■□□□ 1.22
PDE1AP54750 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PDE1AP54750 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PDE1AP54750 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.67■■□□□ 1.22
PDE1AP54750 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.67■■□□□ 1.22
PDE1AP54750 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.67■■□□□ 1.22
PDE1AP54750 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.67■■□□□ 1.22
PDE1AP54750 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.67■■□□□ 1.22
PDE1AP54750 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.67■■□□□ 1.22
PDE1AP54750 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 ESPNP-201ENST00000270691 2015 ntBASIC22.67■■□□□ 1.22
PDE1AP54750 AC135776.1-201ENST00000319817 2481 ntBASIC22.67■■□□□ 1.22
PDE1AP54750 AL162741.1-201ENST00000565563 1558 ntBASIC22.67■■□□□ 1.22
PDE1AP54750 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PDE1AP54750 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.67■■□□□ 1.22
PDE1AP54750 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDE1AP54750 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.66■■□□□ 1.22
PDE1AP54750 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 KRT8P7-201ENST00000533003 1432 ntBASIC22.66■■□□□ 1.22
PDE1AP54750 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.66■■□□□ 1.22
PDE1AP54750 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 AL163051.1-201ENST00000569214 1512 ntBASIC22.66■■□□□ 1.22
PDE1AP54750 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE1AP54750 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE1AP54750 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PDE1AP54750 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDE1AP54750 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDE1AP54750 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.65■■□□□ 1.22
PDE1AP54750 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDE1AP54750 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDE1AP54750 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.65■■□□□ 1.22
PDE1AP54750 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.65■■□□□ 1.22
PDE1AP54750 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.65■■□□□ 1.22
PDE1AP54750 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDE1AP54750 HMGA1P5-201ENST00000412453 271 ntBASIC22.65■■□□□ 1.22
PDE1AP54750 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.65■■□□□ 1.22
PDE1AP54750 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.65■■□□□ 1.22
PDE1AP54750 AC145285.6-201ENST00000604632 637 ntBASIC22.65■■□□□ 1.22
PDE1AP54750 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms