Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 ZNF444P1-201ENST00000559497 298 ntBASIC18.96■□□□□ 0.63
ATXN3P54252 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
ATXN3P54252 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATXN3P54252 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.96■□□□□ 0.63
ATXN3P54252 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.95■□□□□ 0.62
ATXN3P54252 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATXN3P54252 LETM1P2-201ENST00000597330 2178 ntBASIC18.95■□□□□ 0.62
ATXN3P54252 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
ATXN3P54252 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATXN3P54252 KRT8P45-201ENST00000414328 1447 ntBASIC18.95■□□□□ 0.62
ATXN3P54252 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3P54252 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3P54252 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.95■□□□□ 0.62
ATXN3P54252 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATXN3P54252 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.95■□□□□ 0.62
ATXN3P54252 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.95■□□□□ 0.62
ATXN3P54252 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ATXN3P54252 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.95■□□□□ 0.62
ATXN3P54252 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3P54252 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3P54252 AL032819.2-201ENST00000624543 2162 ntBASIC18.95■□□□□ 0.62
ATXN3P54252 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3P54252 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.94■□□□□ 0.62
ATXN3P54252 AC005082.1-201ENST00000413042 2259 ntBASIC18.94■□□□□ 0.62
ATXN3P54252 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.94■□□□□ 0.62
ATXN3P54252 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.94■□□□□ 0.62
ATXN3P54252 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.94■□□□□ 0.62
ATXN3P54252 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.94■□□□□ 0.62
ATXN3P54252 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.94■□□□□ 0.62
ATXN3P54252 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.94■□□□□ 0.62
ATXN3P54252 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.94■□□□□ 0.62
ATXN3P54252 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.94■□□□□ 0.62
ATXN3P54252 CKBP1-201ENST00000565489 1086 ntBASIC18.94■□□□□ 0.62
ATXN3P54252 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.94■□□□□ 0.62
ATXN3P54252 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
ATXN3P54252 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3P54252 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.94■□□□□ 0.62
ATXN3P54252 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ATXN3P54252 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.93■□□□□ 0.62
ATXN3P54252 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ATXN3P54252 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 AC018470.1-201ENST00000624790 3129 ntBASIC18.93■□□□□ 0.62
ATXN3P54252 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
ATXN3P54252 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ATXN3P54252 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.93■□□□□ 0.62
ATXN3P54252 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.93■□□□□ 0.62
ATXN3P54252 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.93■□□□□ 0.62
ATXN3P54252 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.93■□□□□ 0.62
ATXN3P54252 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.93■□□□□ 0.62
ATXN3P54252 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.93■□□□□ 0.62
ATXN3P54252 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
ATXN3P54252 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ATXN3P54252 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATXN3P54252 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms