Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC6A12P48065 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC6A12P48065 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC6A12P48065 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A12P48065 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC6A12P48065 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLC6A12P48065 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SLC6A12P48065 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC6A12P48065 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
SLC6A12P48065 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 ABALON-201ENST00000629058 1903 ntBASIC17.92■□□□□ 0.46
SLC6A12P48065 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC6A12P48065 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC6A12P48065 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC6A12P48065 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLC6A12P48065 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC6A12P48065 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLC6A12P48065 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLC6A12P48065 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 AL163051.1-201ENST00000569214 1512 ntBASIC17.92■□□□□ 0.46
SLC6A12P48065 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A12P48065 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC6A12P48065 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC6A12P48065 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC6A12P48065 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SLC6A12P48065 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SLC6A12P48065 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.91■□□□□ 0.46
SLC6A12P48065 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC6A12P48065 ECEL1P2-202ENST00000465689 757 ntBASIC17.91■□□□□ 0.46
SLC6A12P48065 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC6A12P48065 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC6A12P48065 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A12P48065 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SLC6A12P48065 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A12P48065 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC6A12P48065 AC135776.1-201ENST00000319817 2481 ntBASIC17.9■□□□□ 0.46
SLC6A12P48065 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A12P48065 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC6A12P48065 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A12P48065 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC6A12P48065 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A12P48065 AC093677.2-201ENST00000600169 1863 ntBASIC17.9■□□□□ 0.46
SLC6A12P48065 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLC6A12P48065 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLC6A12P48065 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC6A12P48065 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A12P48065 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms