Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.77■□□□□ 0.76
SSR1P43307 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 PRSS44-201ENST00000515154 1146 ntBASIC19.77■□□□□ 0.76
SSR1P43307 AC090164.3-201ENST00000610780 2143 ntBASIC19.77■□□□□ 0.76
SSR1P43307 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSR1P43307 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSR1P43307 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSR1P43307 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSR1P43307 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
SSR1P43307 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SSR1P43307 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.77■□□□□ 0.75
SSR1P43307 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSR1P43307 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SSR1P43307 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SSR1P43307 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.76■□□□□ 0.75
SSR1P43307 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.76■□□□□ 0.75
SSR1P43307 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.76■□□□□ 0.75
SSR1P43307 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.76■□□□□ 0.75
SSR1P43307 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.76■□□□□ 0.75
SSR1P43307 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 FAM197Y1-201ENST00000421178 764 ntBASIC19.76■□□□□ 0.75
SSR1P43307 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SSR1P43307 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.76■□□□□ 0.75
SSR1P43307 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.76■□□□□ 0.75
SSR1P43307 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.76■□□□□ 0.75
SSR1P43307 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.76■□□□□ 0.75
SSR1P43307 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SSR1P43307 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSR1P43307 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
SSR1P43307 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR1P43307 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR1P43307 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR1P43307 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
SSR1P43307 PRORSD1P-201ENST00000295112 541 ntBASIC19.75■□□□□ 0.75
SSR1P43307 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSR1P43307 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR1P43307 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.75■□□□□ 0.75
SSR1P43307 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSR1P43307 FAM207BP-201ENST00000447172 505 ntBASIC19.75■□□□□ 0.75
SSR1P43307 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.75■□□□□ 0.75
SSR1P43307 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSR1P43307 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.75■□□□□ 0.75
SSR1P43307 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.75■□□□□ 0.75
SSR1P43307 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.75■□□□□ 0.75
SSR1P43307 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.75■□□□□ 0.75
SSR1P43307 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.75■□□□□ 0.75
SSR1P43307 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR1P43307 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR1P43307 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SSR1P43307 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR1P43307 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SSR1P43307 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SSR1P43307 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.74■□□□□ 0.75
SSR1P43307 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.74■□□□□ 0.75
SSR1P43307 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.74■□□□□ 0.75
SSR1P43307 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR1P43307 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR1P43307 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.74■□□□□ 0.75
SSR1P43307 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR1P43307 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.74■□□□□ 0.75
SSR1P43307 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.74■□□□□ 0.75
SSR1P43307 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SSR1P43307 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR1P43307 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.74■□□□□ 0.75
SSR1P43307 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR1P43307 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR1P43307 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.74■□□□□ 0.75
SSR1P43307 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.74■□□□□ 0.75
SSR1P43307 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SSR1P43307 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.74■□□□□ 0.75
SSR1P43307 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.74■□□□□ 0.75
SSR1P43307 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR1P43307 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SSR1P43307 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.73■□□□□ 0.75
SSR1P43307 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SSR1P43307 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.73■□□□□ 0.75
SSR1P43307 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SSR1P43307 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms