Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC120114.3-201ENST00000611923 658 ntBASIC23.53■■□□□ 1.36
COL15A1P39059 AC006538.3-201ENST00000612495 578 ntBASIC23.53■■□□□ 1.36
COL15A1P39059 TP73-AS1-207ENST00000624167 988 ntBASIC23.53■■□□□ 1.36
COL15A1P39059 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
COL15A1P39059 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL15A1P39059 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.53■■□□□ 1.36
COL15A1P39059 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.52■■□□□ 1.36
COL15A1P39059 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.52■■□□□ 1.36
COL15A1P39059 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.52■■□□□ 1.36
COL15A1P39059 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.52■■□□□ 1.36
COL15A1P39059 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
COL15A1P39059 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.52■■□□□ 1.36
COL15A1P39059 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.52■■□□□ 1.36
COL15A1P39059 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.52■■□□□ 1.36
COL15A1P39059 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 KRT89P-201ENST00000620027 1478 ntBASIC23.52■■□□□ 1.36
COL15A1P39059 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
COL15A1P39059 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
COL15A1P39059 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
COL15A1P39059 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.52■■□□□ 1.36
COL15A1P39059 VENTXP7-201ENST00000475503 772 ntBASIC23.52■■□□□ 1.36
COL15A1P39059 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.52■■□□□ 1.36
COL15A1P39059 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.52■■□□□ 1.36
COL15A1P39059 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.52■■□□□ 1.36
COL15A1P39059 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL15A1P39059 AC068587.9-201ENST00000641814 219 ntBASIC23.52■■□□□ 1.36
COL15A1P39059 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
COL15A1P39059 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL15A1P39059 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL15A1P39059 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
COL15A1P39059 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL15A1P39059 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
COL15A1P39059 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.51■■□□□ 1.35
COL15A1P39059 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL15A1P39059 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL15A1P39059 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL15A1P39059 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
COL15A1P39059 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.51■■□□□ 1.35
COL15A1P39059 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.51■■□□□ 1.35
COL15A1P39059 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
COL15A1P39059 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.5■■□□□ 1.35
COL15A1P39059 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.5■■□□□ 1.35
COL15A1P39059 AL353692.3-201ENST00000407031 1396 ntBASIC23.5■■□□□ 1.35
COL15A1P39059 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.5■■□□□ 1.35
COL15A1P39059 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.5■■□□□ 1.35
COL15A1P39059 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.5■■□□□ 1.35
COL15A1P39059 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.5■■□□□ 1.35
COL15A1P39059 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
COL15A1P39059 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL15A1P39059 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
COL15A1P39059 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.49■■□□□ 1.35
COL15A1P39059 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
COL15A1P39059 AF238378.1-201ENST00000526806 358 ntBASIC23.49■■□□□ 1.35
COL15A1P39059 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.49■■□□□ 1.35
COL15A1P39059 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.49■■□□□ 1.35
COL15A1P39059 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.49■■□□□ 1.35
COL15A1P39059 AC007952.6-201ENST00000573168 2673 ntBASIC23.49■■□□□ 1.35
COL15A1P39059 AC003957.1-201ENST00000625108 2673 ntBASIC23.49■■□□□ 1.35
COL15A1P39059 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
COL15A1P39059 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.49■■□□□ 1.35
COL15A1P39059 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL15A1P39059 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL15A1P39059 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL15A1P39059 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL15A1P39059 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL15A1P39059 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms