Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.63■□□□□ 0.41
CHI3L1P36222 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHI3L1P36222 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.63■□□□□ 0.41
CHI3L1P36222 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHI3L1P36222 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHI3L1P36222 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHI3L1P36222 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHI3L1P36222 AL354751.1-201ENST00000412768 1863 ntBASIC17.63■□□□□ 0.41
CHI3L1P36222 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHI3L1P36222 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.63■□□□□ 0.41
CHI3L1P36222 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.62■□□□□ 0.41
CHI3L1P36222 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.62■□□□□ 0.41
CHI3L1P36222 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHI3L1P36222 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.62■□□□□ 0.41
CHI3L1P36222 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
CHI3L1P36222 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 AL499627.1-201ENST00000569373 2188 ntBASIC17.62■□□□□ 0.41
CHI3L1P36222 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.62■□□□□ 0.41
CHI3L1P36222 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.62■□□□□ 0.41
CHI3L1P36222 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CHI3L1P36222 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHI3L1P36222 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.62■□□□□ 0.41
CHI3L1P36222 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.62■□□□□ 0.41
CHI3L1P36222 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.62■□□□□ 0.41
CHI3L1P36222 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.62■□□□□ 0.41
CHI3L1P36222 AF186192.3-201ENST00000583427 947 ntBASIC17.62■□□□□ 0.41
CHI3L1P36222 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.62■□□□□ 0.41
CHI3L1P36222 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.62■□□□□ 0.41
CHI3L1P36222 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.62■□□□□ 0.41
CHI3L1P36222 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.62■□□□□ 0.41
CHI3L1P36222 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHI3L1P36222 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHI3L1P36222 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.61■□□□□ 0.41
CHI3L1P36222 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.61■□□□□ 0.41
CHI3L1P36222 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHI3L1P36222 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.61■□□□□ 0.41
CHI3L1P36222 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHI3L1P36222 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHI3L1P36222 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 FAM207BP-201ENST00000447172 505 ntBASIC17.61■□□□□ 0.41
CHI3L1P36222 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.61■□□□□ 0.41
CHI3L1P36222 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.61■□□□□ 0.41
CHI3L1P36222 AC073195.1-201ENST00000607241 877 ntBASIC17.61■□□□□ 0.41
CHI3L1P36222 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.61■□□□□ 0.41
CHI3L1P36222 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHI3L1P36222 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.61■□□□□ 0.41
CHI3L1P36222 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHI3L1P36222 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHI3L1P36222 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CHI3L1P36222 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHI3L1P36222 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHI3L1P36222 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CHI3L1P36222 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 FAM201B-201ENST00000458407 597 ntBASIC17.6■□□□□ 0.41
CHI3L1P36222 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.6■□□□□ 0.41
CHI3L1P36222 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.6■□□□□ 0.41
CHI3L1P36222 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHI3L1P36222 RARRES2P10-201ENST00000564312 460 ntBASIC17.6■□□□□ 0.41
CHI3L1P36222 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.6■□□□□ 0.41
CHI3L1P36222 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.6■□□□□ 0.41
CHI3L1P36222 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.6■□□□□ 0.41
CHI3L1P36222 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CHI3L1P36222 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHI3L1P36222 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms