Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.68□□□□□ -0.22
CKS2P33552 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
CKS2P33552 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CKS2P33552 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.68□□□□□ -0.22
CKS2P33552 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.68□□□□□ -0.22
CKS2P33552 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CKS2P33552 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CKS2P33552 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 AL355472.2-201ENST00000422958 438 ntBASIC13.68□□□□□ -0.22
CKS2P33552 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.68□□□□□ -0.22
CKS2P33552 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.68□□□□□ -0.22
CKS2P33552 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 AC131212.1-201ENST00000613771 668 ntBASIC13.68□□□□□ -0.22
CKS2P33552 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.68□□□□□ -0.22
CKS2P33552 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CKS2P33552 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.68□□□□□ -0.22
CKS2P33552 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.68□□□□□ -0.22
CKS2P33552 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CKS2P33552 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CKS2P33552 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 PCDHA12-202ENST00000613593 2588 ntBASIC13.68□□□□□ -0.22
CKS2P33552 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CKS2P33552 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS2P33552 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS2P33552 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CKS2P33552 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 AC138028.4-201ENST00000564984 1845 ntBASIC13.67□□□□□ -0.22
CKS2P33552 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.67□□□□□ -0.22
CKS2P33552 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.67□□□□□ -0.22
CKS2P33552 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.67□□□□□ -0.22
CKS2P33552 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS2P33552 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.67□□□□□ -0.22
CKS2P33552 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS2P33552 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.67□□□□□ -0.22
CKS2P33552 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS2P33552 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS2P33552 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS2P33552 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CKS2P33552 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS2P33552 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS2P33552 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CKS2P33552 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS2P33552 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms