Protein–RNA interactions for Protein: P26447

S100A4, Protein S100-A4, humanhuman

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S100A4P26447 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S100A4P26447 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S100A4P26447 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
S100A4P26447 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
S100A4P26447 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S100A4P26447 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S100A4P26447 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S100A4P26447 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
S100A4P26447 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
S100A4P26447 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.9□□□□□ -0.19
S100A4P26447 FZD10-202ENST00000539839 3282 ntBASIC13.89□□□□□ -0.19
S100A4P26447 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 AL354751.1-201ENST00000412768 1863 ntBASIC13.89□□□□□ -0.19
S100A4P26447 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
S100A4P26447 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
S100A4P26447 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.89□□□□□ -0.19
S100A4P26447 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.89□□□□□ -0.19
S100A4P26447 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.89□□□□□ -0.19
S100A4P26447 SOX15-203ENST00000570788 1093 ntBASIC13.89□□□□□ -0.19
S100A4P26447 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.89□□□□□ -0.19
S100A4P26447 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
S100A4P26447 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
S100A4P26447 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
S100A4P26447 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.89□□□□□ -0.19
S100A4P26447 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.89□□□□□ -0.19
S100A4P26447 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
S100A4P26447 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
S100A4P26447 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.89□□□□□ -0.19
S100A4P26447 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
S100A4P26447 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.88□□□□□ -0.19
S100A4P26447 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
S100A4P26447 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
S100A4P26447 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.88□□□□□ -0.19
S100A4P26447 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
S100A4P26447 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.88□□□□□ -0.19
S100A4P26447 CROCCP5-201ENST00000436658 830 ntBASIC13.88□□□□□ -0.19
S100A4P26447 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.88□□□□□ -0.19
S100A4P26447 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.88□□□□□ -0.19
S100A4P26447 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.88□□□□□ -0.19
S100A4P26447 AC008687.6-201ENST00000596318 630 ntBASIC13.88□□□□□ -0.19
S100A4P26447 IKBKGP1-201ENST00000612193 1073 ntBASIC13.88□□□□□ -0.19
S100A4P26447 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
S100A4P26447 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
S100A4P26447 AL133373.2-201ENST00000623187 2828 ntBASIC13.88□□□□□ -0.19
S100A4P26447 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
S100A4P26447 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
S100A4P26447 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
S100A4P26447 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
S100A4P26447 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
S100A4P26447 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S100A4P26447 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
S100A4P26447 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
S100A4P26447 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S100A4P26447 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S100A4P26447 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
S100A4P26447 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S100A4P26447 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.87□□□□□ -0.19
S100A4P26447 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
S100A4P26447 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S100A4P26447 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S100A4P26447 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms