Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP11P24347 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 AC104581.1-202ENST00000635932 2618 ntBASIC17.64■□□□□ 0.41
MMP11P24347 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MMP11P24347 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP11P24347 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
MMP11P24347 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP11P24347 GCSHP2-201ENST00000560971 527 ntBASIC17.64■□□□□ 0.41
MMP11P24347 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP11P24347 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP11P24347 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP11P24347 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
MMP11P24347 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MMP11P24347 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP11P24347 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP11P24347 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP11P24347 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
MMP11P24347 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MMP11P24347 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP11P24347 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP11P24347 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP11P24347 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.63■□□□□ 0.41
MMP11P24347 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP11P24347 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP11P24347 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.63■□□□□ 0.41
MMP11P24347 STARP1-201ENST00000397973 869 ntBASIC17.63■□□□□ 0.41
MMP11P24347 AL023284.2-201ENST00000405850 579 ntBASIC17.63■□□□□ 0.41
MMP11P24347 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.63■□□□□ 0.41
MMP11P24347 KRT18P38-201ENST00000449496 1282 ntBASIC17.63■□□□□ 0.41
MMP11P24347 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP11P24347 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP11P24347 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.63■□□□□ 0.41
MMP11P24347 AP000550.4-202ENST00000639755 178 ntBASIC17.63■□□□□ 0.41
MMP11P24347 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
MMP11P24347 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP11P24347 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP11P24347 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP11P24347 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP11P24347 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP11P24347 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP11P24347 UPK3BP1-201ENST00000428678 509 ntBASIC17.62■□□□□ 0.41
MMP11P24347 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP11P24347 FAM86EP-206ENST00000510506 987 ntBASIC17.62■□□□□ 0.41
MMP11P24347 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MMP11P24347 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.62■□□□□ 0.41
MMP11P24347 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP11P24347 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP11P24347 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP11P24347 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MMP11P24347 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
MMP11P24347 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MMP11P24347 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP11P24347 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP11P24347 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP11P24347 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP11P24347 AC009113.1-201ENST00000570267 2443 ntBASIC17.61■□□□□ 0.41
MMP11P24347 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MMP11P24347 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.61■□□□□ 0.41
MMP11P24347 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP11P24347 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 FP475955.4-201ENST00000623131 1990 ntBASIC17.61■□□□□ 0.41
MMP11P24347 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP11P24347 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.61■□□□□ 0.41
MMP11P24347 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 MCCD1P1-208ENST00000445732 328 ntBASIC17.61■□□□□ 0.41
MMP11P24347 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP11P24347 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms