Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRNB1P11230 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRNB1P11230 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNB1P11230 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRNB1P11230 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRNB1P11230 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHRNB1P11230 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 LETM1P2-201ENST00000597330 2178 ntBASIC18.82■□□□□ 0.6
CHRNB1P11230 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHRNB1P11230 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CHRNB1P11230 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRNB1P11230 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHRNB1P11230 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.81■□□□□ 0.6
CHRNB1P11230 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHRNB1P11230 RNA5SP419-201ENST00000515908 135 ntBASIC18.81■□□□□ 0.6
CHRNB1P11230 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CHRNB1P11230 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHRNB1P11230 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRNB1P11230 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CHRNB1P11230 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRNB1P11230 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHRNB1P11230 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRNB1P11230 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRNB1P11230 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRNB1P11230 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNB1P11230 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHRNB1P11230 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRNB1P11230 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRNB1P11230 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.8■□□□□ 0.6
CHRNB1P11230 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRNB1P11230 AC091607.1-201ENST00000490318 1060 ntBASIC18.8■□□□□ 0.6
CHRNB1P11230 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.8■□□□□ 0.6
CHRNB1P11230 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.8■□□□□ 0.6
CHRNB1P11230 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.8■□□□□ 0.6
CHRNB1P11230 AC064862.7-201ENST00000604520 867 ntBASIC18.8■□□□□ 0.6
CHRNB1P11230 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHRNB1P11230 AF228730.7-201ENST00000641842 219 ntBASIC18.8■□□□□ 0.6
CHRNB1P11230 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHRNB1P11230 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRNB1P11230 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CHRNB1P11230 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNB1P11230 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRNB1P11230 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRNB1P11230 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRNB1P11230 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 NUS1P2-201ENST00000417358 873 ntBASIC18.79■□□□□ 0.6
CHRNB1P11230 VENTXP7-201ENST00000475503 772 ntBASIC18.79■□□□□ 0.6
CHRNB1P11230 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.79■□□□□ 0.6
CHRNB1P11230 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRNB1P11230 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHRNB1P11230 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRNB1P11230 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.79■□□□□ 0.6
CHRNB1P11230 TP73-AS1-207ENST00000624167 988 ntBASIC18.79■□□□□ 0.6
CHRNB1P11230 AC117500.6-201ENST00000624871 588 ntBASIC18.79■□□□□ 0.6
CHRNB1P11230 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNB1P11230 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms