Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
UBCP0CG48 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.32■□□□□ 0.2
UBCP0CG48 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
UBCP0CG48 HLA-L-209ENST00000420110 1011 ntBASIC16.32■□□□□ 0.2
UBCP0CG48 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UBCP0CG48 AC004980.1-204ENST00000429707 299 ntBASIC16.32■□□□□ 0.2
UBCP0CG48 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
UBCP0CG48 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.32■□□□□ 0.2
UBCP0CG48 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.32■□□□□ 0.2
UBCP0CG48 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.32■□□□□ 0.2
UBCP0CG48 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
UBCP0CG48 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
UBCP0CG48 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.32■□□□□ 0.2
UBCP0CG48 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UBCP0CG48 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.32■□□□□ 0.2
UBCP0CG48 AC124016.1-201ENST00000609552 612 ntBASIC16.32■□□□□ 0.2
UBCP0CG48 AC110285.5-201ENST00000611501 352 ntBASIC16.32■□□□□ 0.2
UBCP0CG48 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.32■□□□□ 0.2
UBCP0CG48 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.32■□□□□ 0.2
UBCP0CG48 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.32■□□□□ 0.2
UBCP0CG48 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.32■□□□□ 0.2
UBCP0CG48 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBCP0CG48 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBCP0CG48 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.31■□□□□ 0.2
UBCP0CG48 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 KRT8P45-201ENST00000414328 1447 ntBASIC16.31■□□□□ 0.2
UBCP0CG48 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBCP0CG48 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBCP0CG48 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
UBCP0CG48 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.31■□□□□ 0.2
UBCP0CG48 AP002982.1-201ENST00000492365 877 ntBASIC16.31■□□□□ 0.2
UBCP0CG48 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.31■□□□□ 0.2
UBCP0CG48 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.31■□□□□ 0.2
UBCP0CG48 AL499627.1-201ENST00000569373 2188 ntBASIC16.31■□□□□ 0.2
UBCP0CG48 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBCP0CG48 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 AC068880.1-201ENST00000507289 2297 ntBASIC16.3■□□□□ 0.2
UBCP0CG48 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.3■□□□□ 0.2
UBCP0CG48 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 OR6D1P-202ENST00000641007 5290 ntBASIC16.3■□□□□ 0.2
UBCP0CG48 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBCP0CG48 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBCP0CG48 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.3■□□□□ 0.2
UBCP0CG48 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.3■□□□□ 0.2
UBCP0CG48 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.3■□□□□ 0.2
UBCP0CG48 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
UBCP0CG48 AL353708.3-201ENST00000610272 989 ntBASIC16.3■□□□□ 0.2
UBCP0CG48 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBCP0CG48 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.3■□□□□ 0.2
UBCP0CG48 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBCP0CG48 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBCP0CG48 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.29■□□□□ 0.2
UBCP0CG48 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms