Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
FAM228BP0C875 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
FAM228BP0C875 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
FAM228BP0C875 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.83■□□□□ 0.77
FAM228BP0C875 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
FAM228BP0C875 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.83■□□□□ 0.77
FAM228BP0C875 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FAM228BP0C875 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.83■□□□□ 0.76
FAM228BP0C875 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FAM228BP0C875 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.83■□□□□ 0.76
FAM228BP0C875 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
FAM228BP0C875 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FAM228BP0C875 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FAM228BP0C875 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FAM228BP0C875 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FAM228BP0C875 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FAM228BP0C875 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
FAM228BP0C875 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
FAM228BP0C875 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.82■□□□□ 0.76
FAM228BP0C875 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.82■□□□□ 0.76
FAM228BP0C875 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.82■□□□□ 0.76
FAM228BP0C875 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.82■□□□□ 0.76
FAM228BP0C875 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.82■□□□□ 0.76
FAM228BP0C875 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.82■□□□□ 0.76
FAM228BP0C875 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.82■□□□□ 0.76
FAM228BP0C875 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.82■□□□□ 0.76
FAM228BP0C875 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
FAM228BP0C875 FAM197Y4-202ENST00000622692 608 ntBASIC19.82■□□□□ 0.76
FAM228BP0C875 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
FAM228BP0C875 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.82■□□□□ 0.76
FAM228BP0C875 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.82■□□□□ 0.76
FAM228BP0C875 AC096733.2-201ENST00000609937 1394 ntBASIC19.82■□□□□ 0.76
FAM228BP0C875 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
FAM228BP0C875 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM228BP0C875 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.82■□□□□ 0.76
FAM228BP0C875 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 GPAT2P1-201ENST00000444924 1672 ntBASIC19.81■□□□□ 0.76
FAM228BP0C875 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.81■□□□□ 0.76
FAM228BP0C875 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.81■□□□□ 0.76
FAM228BP0C875 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 AL023284.2-201ENST00000405850 579 ntBASIC19.81■□□□□ 0.76
FAM228BP0C875 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.81■□□□□ 0.76
FAM228BP0C875 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.81■□□□□ 0.76
FAM228BP0C875 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.81■□□□□ 0.76
FAM228BP0C875 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.81■□□□□ 0.76
FAM228BP0C875 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.81■□□□□ 0.76
FAM228BP0C875 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.81■□□□□ 0.76
FAM228BP0C875 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.81■□□□□ 0.76
FAM228BP0C875 CD177P1-201ENST00000606252 935 ntBASIC19.81■□□□□ 0.76
FAM228BP0C875 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
FAM228BP0C875 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.81■□□□□ 0.76
FAM228BP0C875 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM228BP0C875 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
FAM228BP0C875 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.81■□□□□ 0.76
FAM228BP0C875 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
FAM228BP0C875 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM228BP0C875 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FAM228BP0C875 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM228BP0C875 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM228BP0C875 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FAM228BP0C875 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
FAM228BP0C875 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
FAM228BP0C875 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM228BP0C875 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.8■□□□□ 0.76
FAM228BP0C875 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM228BP0C875 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.8■□□□□ 0.76
FAM228BP0C875 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM228BP0C875 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms