Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
APOA4P06727 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.66■□□□□ 0.58
APOA4P06727 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.66■□□□□ 0.58
APOA4P06727 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.66■□□□□ 0.58
APOA4P06727 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.66■□□□□ 0.58
APOA4P06727 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.66■□□□□ 0.58
APOA4P06727 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.66■□□□□ 0.58
APOA4P06727 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.66■□□□□ 0.58
APOA4P06727 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 HEIH-201ENST00000623091 1652 ntBASIC18.66■□□□□ 0.58
APOA4P06727 AC096733.2-201ENST00000609937 1394 ntBASIC18.66■□□□□ 0.58
APOA4P06727 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.66■□□□□ 0.58
APOA4P06727 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
APOA4P06727 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
APOA4P06727 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
APOA4P06727 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
APOA4P06727 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
APOA4P06727 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
APOA4P06727 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
APOA4P06727 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.65■□□□□ 0.58
APOA4P06727 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
APOA4P06727 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.65■□□□□ 0.58
APOA4P06727 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
APOA4P06727 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA4P06727 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.65■□□□□ 0.58
APOA4P06727 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.65■□□□□ 0.58
APOA4P06727 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.64■□□□□ 0.58
APOA4P06727 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
APOA4P06727 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
APOA4P06727 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
APOA4P06727 CRYGFP-201ENST00000418459 633 ntBASIC18.64■□□□□ 0.57
APOA4P06727 MFAP1P1-201ENST00000442257 1255 ntBASIC18.64■□□□□ 0.57
APOA4P06727 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.64■□□□□ 0.57
APOA4P06727 RBM17P1-201ENST00000453646 1190 ntBASIC18.64■□□□□ 0.57
APOA4P06727 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
APOA4P06727 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.64■□□□□ 0.57
APOA4P06727 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
APOA4P06727 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.64■□□□□ 0.57
APOA4P06727 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
APOA4P06727 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
APOA4P06727 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.64■□□□□ 0.57
APOA4P06727 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
APOA4P06727 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
APOA4P06727 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
APOA4P06727 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA4P06727 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
APOA4P06727 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.63■□□□□ 0.57
APOA4P06727 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.63■□□□□ 0.57
APOA4P06727 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.63■□□□□ 0.57
APOA4P06727 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.63■□□□□ 0.57
APOA4P06727 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.63■□□□□ 0.57
APOA4P06727 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.63■□□□□ 0.57
APOA4P06727 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.63■□□□□ 0.57
APOA4P06727 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.63■□□□□ 0.57
APOA4P06727 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms