Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 VENTXP5-201ENST00000523979 775 ntBASIC22.32■■□□□ 1.16
CHGBP05060 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.32■■□□□ 1.16
CHGBP05060 MIR3917-201ENST00000580971 93 ntBASIC22.32■■□□□ 1.16
CHGBP05060 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.32■■□□□ 1.16
CHGBP05060 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.32■■□□□ 1.16
CHGBP05060 AL590326.2-201ENST00000625139 305 ntBASIC22.32■■□□□ 1.16
CHGBP05060 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHGBP05060 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHGBP05060 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHGBP05060 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHGBP05060 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHGBP05060 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.32■■□□□ 1.16
CHGBP05060 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.32■■□□□ 1.16
CHGBP05060 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.31■■□□□ 1.16
CHGBP05060 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CHGBP05060 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CHGBP05060 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 ARMC10P1-201ENST00000313754 855 ntBASIC22.31■■□□□ 1.16
CHGBP05060 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.31■■□□□ 1.16
CHGBP05060 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 AC092647.4-201ENST00000457211 535 ntBASIC22.31■■□□□ 1.16
CHGBP05060 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.31■■□□□ 1.16
CHGBP05060 AL031432.5-201ENST00000641059 760 ntBASIC22.31■■□□□ 1.16
CHGBP05060 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.31■■□□□ 1.16
CHGBP05060 AC009113.1-201ENST00000570267 2443 ntBASIC22.31■■□□□ 1.16
CHGBP05060 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHGBP05060 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHGBP05060 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.3■■□□□ 1.16
CHGBP05060 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.3■■□□□ 1.16
CHGBP05060 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.3■■□□□ 1.16
CHGBP05060 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.3■■□□□ 1.16
CHGBP05060 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
CHGBP05060 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.3■■□□□ 1.16
CHGBP05060 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
CHGBP05060 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.3■■□□□ 1.16
CHGBP05060 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.3■■□□□ 1.16
CHGBP05060 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.3■■□□□ 1.16
CHGBP05060 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.3■■□□□ 1.16
CHGBP05060 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.3■■□□□ 1.16
CHGBP05060 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHGBP05060 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.29■■□□□ 1.16
CHGBP05060 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.29■■□□□ 1.16
CHGBP05060 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.29■■□□□ 1.16
CHGBP05060 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.29■■□□□ 1.16
CHGBP05060 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.29■■□□□ 1.16
CHGBP05060 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CHGBP05060 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.29■■□□□ 1.16
CHGBP05060 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CHGBP05060 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHGBP05060 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.28■■□□□ 1.16
CHGBP05060 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CHGBP05060 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 AL671277.2-201ENST00000458060 996 ntBASIC22.28■■□□□ 1.16
CHGBP05060 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms