Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.54■□□□□ 0.4
MT-ND1P03886 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.54■□□□□ 0.4
MT-ND1P03886 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
MT-ND1P03886 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
MT-ND1P03886 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
MT-ND1P03886 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
MT-ND1P03886 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.54■□□□□ 0.4
MT-ND1P03886 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.54■□□□□ 0.4
MT-ND1P03886 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
MT-ND1P03886 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.53■□□□□ 0.4
MT-ND1P03886 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-ND1P03886 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-ND1P03886 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND1P03886 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-ND1P03886 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND1P03886 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND1P03886 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND1P03886 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND1P03886 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MT-ND1P03886 TSPY21P-201ENST00000433481 731 ntBASIC17.53■□□□□ 0.4
MT-ND1P03886 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND1P03886 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.53■□□□□ 0.4
MT-ND1P03886 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-ND1P03886 UNC93B4-201ENST00000505679 747 ntBASIC17.53■□□□□ 0.4
MT-ND1P03886 AC090192.1-201ENST00000517740 490 ntBASIC17.53■□□□□ 0.4
MT-ND1P03886 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
MT-ND1P03886 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-ND1P03886 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND1P03886 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
MT-ND1P03886 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND1P03886 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MT-ND1P03886 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
MT-ND1P03886 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 MTMR9LP-203ENST00000426597 1545 ntBASIC17.52■□□□□ 0.4
MT-ND1P03886 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.52■□□□□ 0.4
MT-ND1P03886 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-ND1P03886 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
MT-ND1P03886 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
MT-ND1P03886 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MT-ND1P03886 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
MT-ND1P03886 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.52■□□□□ 0.4
MT-ND1P03886 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-ND1P03886 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.52■□□□□ 0.4
MT-ND1P03886 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-ND1P03886 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-ND1P03886 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-ND1P03886 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
MT-ND1P03886 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-ND1P03886 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-ND1P03886 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.39
MT-ND1P03886 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-ND1P03886 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.52■□□□□ 0.39
MT-ND1P03886 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-ND1P03886 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
MT-ND1P03886 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-ND1P03886 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.52■□□□□ 0.39
MT-ND1P03886 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND1P03886 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND1P03886 PCDHA12-202ENST00000613593 2588 ntBASIC17.51■□□□□ 0.39
MT-ND1P03886 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 AC009053.2-201ENST00000563701 2365 ntBASIC17.51■□□□□ 0.39
MT-ND1P03886 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-ND1P03886 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 GNAS-203ENST00000306120 1878 ntBASIC17.51■□□□□ 0.39
MT-ND1P03886 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-ND1P03886 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND1P03886 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-ND1P03886 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND1P03886 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-ND1P03886 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.51■□□□□ 0.39
MT-ND1P03886 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.51■□□□□ 0.39
MT-ND1P03886 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms