Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.53■□□□□ 0.88
CD4P01730 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.53■□□□□ 0.88
CD4P01730 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CD4P01730 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD4P01730 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CD4P01730 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD4P01730 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD4P01730 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD4P01730 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD4P01730 AL590627.1-203ENST00000421194 1026 ntBASIC20.52■□□□□ 0.88
CD4P01730 AF238378.1-201ENST00000526806 358 ntBASIC20.52■□□□□ 0.88
CD4P01730 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CD4P01730 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.52■□□□□ 0.88
CD4P01730 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.52■□□□□ 0.88
CD4P01730 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD4P01730 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CD4P01730 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.52■□□□□ 0.88
CD4P01730 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CD4P01730 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CD4P01730 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.52■□□□□ 0.87
CD4P01730 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CD4P01730 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CD4P01730 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.51■□□□□ 0.87
CD4P01730 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD4P01730 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD4P01730 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.51■□□□□ 0.87
CD4P01730 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
CD4P01730 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD4P01730 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CD4P01730 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CD4P01730 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.51■□□□□ 0.87
CD4P01730 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.51■□□□□ 0.87
CD4P01730 AP005901.3-202ENST00000581653 237 ntBASIC20.51■□□□□ 0.87
CD4P01730 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.51■□□□□ 0.87
CD4P01730 AC124864.1-201ENST00000623408 392 ntBASIC20.51■□□□□ 0.87
CD4P01730 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.51■□□□□ 0.87
CD4P01730 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.51■□□□□ 0.87
CD4P01730 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CD4P01730 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD4P01730 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CD4P01730 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD4P01730 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD4P01730 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.51■□□□□ 0.87
CD4P01730 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.51■□□□□ 0.87
CD4P01730 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD4P01730 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD4P01730 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.5■□□□□ 0.87
CD4P01730 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CD4P01730 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.5■□□□□ 0.87
CD4P01730 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.5■□□□□ 0.87
CD4P01730 NSUN5P1-202ENST00000421140 1535 ntBASIC20.5■□□□□ 0.87
CD4P01730 NSUN5P2-203ENST00000457352 1529 ntBASIC20.5■□□□□ 0.87
CD4P01730 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.5■□□□□ 0.87
CD4P01730 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
CD4P01730 GUSBP12-201ENST00000513727 720 ntBASIC20.5■□□□□ 0.87
CD4P01730 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
CD4P01730 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.5■□□□□ 0.87
CD4P01730 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
CD4P01730 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 TEX21P-204ENST00000641479 1693 ntBASIC20.5■□□□□ 0.87
CD4P01730 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.5■□□□□ 0.87
CD4P01730 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD4P01730 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.5■□□□□ 0.87
CD4P01730 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CD4P01730 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD4P01730 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CD4P01730 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD4P01730 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD4P01730 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD4P01730 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD4P01730 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.49■□□□□ 0.87
CD4P01730 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.49■□□□□ 0.87
CD4P01730 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.49■□□□□ 0.87
CD4P01730 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CD4P01730 AC117500.6-201ENST00000624871 588 ntBASIC20.49■□□□□ 0.87
CD4P01730 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.49■□□□□ 0.87
CD4P01730 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD4P01730 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD4P01730 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD4P01730 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CD4P01730 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CD4P01730 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CD4P01730 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.48■□□□□ 0.87
CD4P01730 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD4P01730 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD4P01730 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms