Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX3O95343 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SIX3O95343 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX3O95343 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SIX3O95343 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX3O95343 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SIX3O95343 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 LETM1P2-201ENST00000597330 2178 ntBASIC18.18■□□□□ 0.5
SIX3O95343 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SIX3O95343 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIX3O95343 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.18■□□□□ 0.5
SIX3O95343 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIX3O95343 AL162741.1-201ENST00000565563 1558 ntBASIC18.18■□□□□ 0.5
SIX3O95343 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 NOC2LP2-201ENST00000407594 1944 ntBASIC18.18■□□□□ 0.5
SIX3O95343 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 AL135905.2-201ENST00000584934 1404 ntBASIC18.18■□□□□ 0.5
SIX3O95343 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SIX3O95343 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 AL158047.1-201ENST00000445918 881 ntBASIC18.18■□□□□ 0.5
SIX3O95343 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SIX3O95343 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.18■□□□□ 0.5
SIX3O95343 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.18■□□□□ 0.5
SIX3O95343 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.18■□□□□ 0.5
SIX3O95343 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX3O95343 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SIX3O95343 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX3O95343 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SIX3O95343 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.17■□□□□ 0.5
SIX3O95343 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SIX3O95343 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX3O95343 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX3O95343 SLC25A1P4-201ENST00000567977 778 ntBASIC18.17■□□□□ 0.5
SIX3O95343 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.17■□□□□ 0.5
SIX3O95343 MYC-208ENST00000641036 567 ntBASIC18.17■□□□□ 0.5
SIX3O95343 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.17■□□□□ 0.5
SIX3O95343 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 AL109659.2-201ENST00000606809 1674 ntBASIC18.17■□□□□ 0.5
SIX3O95343 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SIX3O95343 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIX3O95343 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX3O95343 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIX3O95343 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX3O95343 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SIX3O95343 AC096733.2-201ENST00000609937 1394 ntBASIC18.17■□□□□ 0.5
SIX3O95343 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SIX3O95343 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SIX3O95343 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
SIX3O95343 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX3O95343 MFAP1P1-201ENST00000442257 1255 ntBASIC18.16■□□□□ 0.5
SIX3O95343 GCSHP5-201ENST00000443090 522 ntBASIC18.16■□□□□ 0.5
SIX3O95343 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 AC116562.2-201ENST00000507042 360 ntBASIC18.16■□□□□ 0.5
SIX3O95343 NUDT16P1-203ENST00000513809 620 ntBASIC18.16■□□□□ 0.5
SIX3O95343 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX3O95343 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.16■□□□□ 0.5
SIX3O95343 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX3O95343 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.16■□□□□ 0.5
SIX3O95343 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.16■□□□□ 0.5
SIX3O95343 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX3O95343 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIX3O95343 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX3O95343 GPAT2P1-201ENST00000444924 1672 ntBASIC18.15■□□□□ 0.5
SIX3O95343 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.15■□□□□ 0.5
SIX3O95343 AC099343.3-201ENST00000605834 2503 ntBASIC18.15■□□□□ 0.5
SIX3O95343 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIX3O95343 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX3O95343 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms