Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.54■□□□□ 0.56
NDUFS3O75489 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.54■□□□□ 0.56
NDUFS3O75489 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NDUFS3O75489 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.54■□□□□ 0.56
NDUFS3O75489 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
NDUFS3O75489 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 CCR12P-201ENST00000446203 998 ntBASIC18.54■□□□□ 0.56
NDUFS3O75489 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.54■□□□□ 0.56
NDUFS3O75489 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.54■□□□□ 0.56
NDUFS3O75489 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.54■□□□□ 0.56
NDUFS3O75489 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NDUFS3O75489 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.54■□□□□ 0.56
NDUFS3O75489 C2orf69P3-201ENST00000565542 1120 ntBASIC18.54■□□□□ 0.56
NDUFS3O75489 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
NDUFS3O75489 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NDUFS3O75489 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NDUFS3O75489 MIR564-202ENST00000385049 94 ntBASIC18.53■□□□□ 0.56
NDUFS3O75489 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.53■□□□□ 0.56
NDUFS3O75489 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NDUFS3O75489 AC093827.2-201ENST00000512654 315 ntBASIC18.53■□□□□ 0.56
NDUFS3O75489 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFS3O75489 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.53■□□□□ 0.56
NDUFS3O75489 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.53■□□□□ 0.56
NDUFS3O75489 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
NDUFS3O75489 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.53■□□□□ 0.56
NDUFS3O75489 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.52■□□□□ 0.56
NDUFS3O75489 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.52■□□□□ 0.56
NDUFS3O75489 AC073592.3-201ENST00000625118 1834 ntBASIC18.52■□□□□ 0.56
NDUFS3O75489 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.52■□□□□ 0.56
NDUFS3O75489 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NDUFS3O75489 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NDUFS3O75489 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.52■□□□□ 0.56
NDUFS3O75489 AL353719.1-201ENST00000566847 864 ntBASIC18.52■□□□□ 0.56
NDUFS3O75489 AL023803.3-201ENST00000615559 522 ntBASIC18.52■□□□□ 0.56
NDUFS3O75489 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.52■□□□□ 0.56
NDUFS3O75489 AC116562.4-202ENST00000641738 218 ntBASIC18.52■□□□□ 0.56
NDUFS3O75489 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
NDUFS3O75489 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NDUFS3O75489 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFS3O75489 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.52■□□□□ 0.55
NDUFS3O75489 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NDUFS3O75489 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.52■□□□□ 0.55
NDUFS3O75489 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NDUFS3O75489 NEFHP1-201ENST00000412845 2629 ntBASIC18.52■□□□□ 0.55
NDUFS3O75489 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NDUFS3O75489 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFS3O75489 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.51■□□□□ 0.55
NDUFS3O75489 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NDUFS3O75489 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFS3O75489 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NDUFS3O75489 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.51■□□□□ 0.55
NDUFS3O75489 KRT8P45-201ENST00000414328 1447 ntBASIC18.51■□□□□ 0.55
NDUFS3O75489 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFS3O75489 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFS3O75489 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFS3O75489 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFS3O75489 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.51■□□□□ 0.55
NDUFS3O75489 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.51■□□□□ 0.55
NDUFS3O75489 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFS3O75489 TSPY15P-201ENST00000457163 923 ntBASIC18.51■□□□□ 0.55
NDUFS3O75489 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms