Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SEC1P-202ENST00000473944 940 ntBASIC18.41■□□□□ 0.54
PCDHGA12O60330 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 TREX1-205ENST00000625293 1783 ntBASIC18.4■□□□□ 0.54
PCDHGA12O60330 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 AL845331.1-201ENST00000424978 1190 ntBASIC18.4■□□□□ 0.54
PCDHGA12O60330 CHCHD2P8-201ENST00000429873 447 ntBASIC18.4■□□□□ 0.54
PCDHGA12O60330 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 AP002414.4-201ENST00000589764 1148 ntBASIC18.4■□□□□ 0.54
PCDHGA12O60330 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA12O60330 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA12O60330 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDHGA12O60330 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGA12O60330 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PCDHGA12O60330 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHGA12O60330 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA12O60330 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 MIR662-201ENST00000384847 95 ntBASIC18.38■□□□□ 0.53
PCDHGA12O60330 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms