Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 RASA4DP-201ENST00000460726 1199 ntBASIC17.83■□□□□ 0.44
PRICKLE3O43900 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.83■□□□□ 0.44
PRICKLE3O43900 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.83■□□□□ 0.44
PRICKLE3O43900 HYMAI.1-201ENST00000620949 238 ntBASIC17.83■□□□□ 0.44
PRICKLE3O43900 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.83■□□□□ 0.44
PRICKLE3O43900 AL157888.1-201ENST00000631930 593 ntBASIC17.83■□□□□ 0.44
PRICKLE3O43900 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.83■□□□□ 0.44
PRICKLE3O43900 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 AL138781.2-201ENST00000617896 1843 ntBASIC17.83■□□□□ 0.44
PRICKLE3O43900 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PRICKLE3O43900 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PRICKLE3O43900 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.83■□□□□ 0.44
PRICKLE3O43900 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRICKLE3O43900 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PRICKLE3O43900 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRICKLE3O43900 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.81■□□□□ 0.44
PRICKLE3O43900 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.81■□□□□ 0.44
PRICKLE3O43900 AC034232.1-201ENST00000506026 1064 ntBASIC17.81■□□□□ 0.44
PRICKLE3O43900 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.81■□□□□ 0.44
PRICKLE3O43900 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.81■□□□□ 0.44
PRICKLE3O43900 AL590326.2-201ENST00000625139 305 ntBASIC17.81■□□□□ 0.44
PRICKLE3O43900 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRICKLE3O43900 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PRICKLE3O43900 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.8■□□□□ 0.44
PRICKLE3O43900 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRICKLE3O43900 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
PRICKLE3O43900 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRICKLE3O43900 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
PRICKLE3O43900 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRICKLE3O43900 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRICKLE3O43900 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.8■□□□□ 0.44
PRICKLE3O43900 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRICKLE3O43900 AL359075.1-203ENST00000462729 1002 ntBASIC17.8■□□□□ 0.44
PRICKLE3O43900 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.8■□□□□ 0.44
PRICKLE3O43900 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.8■□□□□ 0.44
PRICKLE3O43900 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRICKLE3O43900 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.8■□□□□ 0.44
PRICKLE3O43900 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.8■□□□□ 0.44
PRICKLE3O43900 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms