Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 FER1L4-210ENST00000615531 5998 ntBASIC17.06■□□□□ 0.32
IDH3BO43837 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IDH3BO43837 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 KRT17P3-201ENST00000420566 1262 ntBASIC17.06■□□□□ 0.32
IDH3BO43837 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.06■□□□□ 0.32
IDH3BO43837 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.06■□□□□ 0.32
IDH3BO43837 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.06■□□□□ 0.32
IDH3BO43837 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.06■□□□□ 0.32
IDH3BO43837 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
IDH3BO43837 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IDH3BO43837 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
IDH3BO43837 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.05■□□□□ 0.32
IDH3BO43837 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.05■□□□□ 0.32
IDH3BO43837 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.05■□□□□ 0.32
IDH3BO43837 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.05■□□□□ 0.32
IDH3BO43837 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.05■□□□□ 0.32
IDH3BO43837 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.05■□□□□ 0.32
IDH3BO43837 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
IDH3BO43837 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.05■□□□□ 0.32
IDH3BO43837 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.05■□□□□ 0.32
IDH3BO43837 TSPY23P-201ENST00000440136 739 ntBASIC17.05■□□□□ 0.32
IDH3BO43837 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.05■□□□□ 0.32
IDH3BO43837 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.05■□□□□ 0.32
IDH3BO43837 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.05■□□□□ 0.32
IDH3BO43837 AC008403.3-201ENST00000598924 454 ntBASIC17.05■□□□□ 0.32
IDH3BO43837 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.05■□□□□ 0.32
IDH3BO43837 AL354751.1-201ENST00000412768 1863 ntBASIC17.05■□□□□ 0.32
IDH3BO43837 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
IDH3BO43837 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IDH3BO43837 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
IDH3BO43837 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.04■□□□□ 0.32
IDH3BO43837 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
IDH3BO43837 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.04■□□□□ 0.32
IDH3BO43837 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IDH3BO43837 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms