Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 HMGA1P5-201ENST00000412453 271 ntBASIC16.55■□□□□ 0.24
TRAF3IP2O43734 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 AC073912.3-201ENST00000624414 853 ntBASIC16.55■□□□□ 0.24
TRAF3IP2O43734 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 KRT8P50-201ENST00000562022 1438 ntBASIC16.54■□□□□ 0.24
TRAF3IP2O43734 HOXB1-202ENST00000577092 1414 ntBASIC16.54■□□□□ 0.24
TRAF3IP2O43734 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 KRT18P22-201ENST00000402024 1347 ntBASIC16.54■□□□□ 0.24
TRAF3IP2O43734 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 AP000593.1-201ENST00000393668 712 ntBASIC16.54■□□□□ 0.24
TRAF3IP2O43734 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 MYLKP1-201ENST00000509077 1580 ntBASIC16.54■□□□□ 0.24
TRAF3IP2O43734 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP2O43734 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms