Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
ACTN4O43707 MCCD1P1-208ENST00000445732 328 ntBASIC20.86■□□□□ 0.93
ACTN4O43707 CA15P1-201ENST00000481698 905 ntBASIC20.86■□□□□ 0.93
ACTN4O43707 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.86■□□□□ 0.93
ACTN4O43707 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.86■□□□□ 0.93
ACTN4O43707 AP001412.1-201ENST00000608405 714 ntBASIC20.86■□□□□ 0.93
ACTN4O43707 AC026471.5-201ENST00000615068 467 ntBASIC20.86■□□□□ 0.93
ACTN4O43707 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.86■□□□□ 0.93
ACTN4O43707 ESPNP-201ENST00000270691 2015 ntBASIC20.86■□□□□ 0.93
ACTN4O43707 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ACTN4O43707 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.86■□□□□ 0.93
ACTN4O43707 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
ACTN4O43707 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.86■□□□□ 0.93
ACTN4O43707 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.85■□□□□ 0.93
ACTN4O43707 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.85■□□□□ 0.93
ACTN4O43707 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.85■□□□□ 0.93
ACTN4O43707 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ACTN4O43707 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.85■□□□□ 0.93
ACTN4O43707 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.85■□□□□ 0.93
ACTN4O43707 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.85■□□□□ 0.93
ACTN4O43707 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.85■□□□□ 0.93
ACTN4O43707 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.85■□□□□ 0.93
ACTN4O43707 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACTN4O43707 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.84■□□□□ 0.93
ACTN4O43707 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
ACTN4O43707 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.84■□□□□ 0.93
ACTN4O43707 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.84■□□□□ 0.93
ACTN4O43707 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.84■□□□□ 0.93
ACTN4O43707 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ACTN4O43707 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 CRYGFP-201ENST00000418459 633 ntBASIC20.84■□□□□ 0.93
ACTN4O43707 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.84■□□□□ 0.93
ACTN4O43707 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ACTN4O43707 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.84■□□□□ 0.93
ACTN4O43707 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.84■□□□□ 0.93
ACTN4O43707 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.84■□□□□ 0.93
ACTN4O43707 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 AC068880.1-201ENST00000507289 2297 ntBASIC20.84■□□□□ 0.93
ACTN4O43707 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ACTN4O43707 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACTN4O43707 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.83■□□□□ 0.93
ACTN4O43707 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.83■□□□□ 0.93
ACTN4O43707 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.83■□□□□ 0.93
ACTN4O43707 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ACTN4O43707 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.83■□□□□ 0.93
ACTN4O43707 AL355355.2-201ENST00000442321 338 ntBASIC20.83■□□□□ 0.93
ACTN4O43707 AP005242.2-201ENST00000580065 1175 ntBASIC20.83■□□□□ 0.93
ACTN4O43707 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACTN4O43707 KRT8P50-201ENST00000562022 1438 ntBASIC20.83■□□□□ 0.93
ACTN4O43707 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.83■□□□□ 0.92
ACTN4O43707 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ACTN4O43707 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ACTN4O43707 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ACTN4O43707 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.82■□□□□ 0.92
ACTN4O43707 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.82■□□□□ 0.92
ACTN4O43707 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACTN4O43707 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACTN4O43707 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.82■□□□□ 0.92
ACTN4O43707 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ACTN4O43707 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.82■□□□□ 0.92
ACTN4O43707 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.82■□□□□ 0.92
ACTN4O43707 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.82■□□□□ 0.92
ACTN4O43707 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms