Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.26■□□□□ 0.51
CDC7O00311 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.26■□□□□ 0.51
CDC7O00311 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDC7O00311 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.26■□□□□ 0.51
CDC7O00311 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.26■□□□□ 0.51
CDC7O00311 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDC7O00311 AC079598.2-202ENST00000546624 1451 ntBASIC18.26■□□□□ 0.51
CDC7O00311 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDC7O00311 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDC7O00311 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.25■□□□□ 0.51
CDC7O00311 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.25■□□□□ 0.51
CDC7O00311 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CDC7O00311 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 UNC93B2-201ENST00000285383 730 ntBASIC18.25■□□□□ 0.51
CDC7O00311 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CDC7O00311 AL390955.1-201ENST00000428694 934 ntBASIC18.25■□□□□ 0.51
CDC7O00311 SNORA78-201ENST00000459373 127 ntBASIC18.25■□□□□ 0.51
CDC7O00311 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.25■□□□□ 0.51
CDC7O00311 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.25■□□□□ 0.51
CDC7O00311 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.25■□□□□ 0.51
CDC7O00311 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.25■□□□□ 0.51
CDC7O00311 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CDC7O00311 AP000525.1-201ENST00000608286 694 ntBASIC18.25■□□□□ 0.51
CDC7O00311 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.25■□□□□ 0.51
CDC7O00311 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.25■□□□□ 0.51
CDC7O00311 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC7O00311 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CDC7O00311 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CDC7O00311 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.24■□□□□ 0.51
CDC7O00311 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDC7O00311 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.24■□□□□ 0.51
CDC7O00311 MIR4785-201ENST00000585005 73 ntBASIC18.24■□□□□ 0.51
CDC7O00311 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.24■□□□□ 0.51
CDC7O00311 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 MYLKP1-201ENST00000509077 1580 ntBASIC18.24■□□□□ 0.51
CDC7O00311 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.24■□□□□ 0.51
CDC7O00311 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.24■□□□□ 0.51
CDC7O00311 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.24■□□□□ 0.51
CDC7O00311 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.24■□□□□ 0.51
CDC7O00311 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDC7O00311 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC7O00311 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDC7O00311 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC7O00311 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC7O00311 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.23■□□□□ 0.51
CDC7O00311 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDC7O00311 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDC7O00311 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC7O00311 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC7O00311 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDC7O00311 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC7O00311 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDC7O00311 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDC7O00311 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms