Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
TAF4O00268 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TAF4O00268 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TAF4O00268 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.18■□□□□ 0.5
TAF4O00268 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TAF4O00268 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TAF4O00268 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TAF4O00268 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
TAF4O00268 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.18■□□□□ 0.5
TAF4O00268 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TAF4O00268 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 MIR574-201ENST00000385209 96 ntBASIC18.17■□□□□ 0.5
TAF4O00268 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 AL662844.1-201ENST00000546340 181 ntBASIC18.17■□□□□ 0.5
TAF4O00268 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 AC091304.2-201ENST00000564639 760 ntBASIC18.17■□□□□ 0.5
TAF4O00268 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.17■□□□□ 0.5
TAF4O00268 AC018553.1-201ENST00000616682 1458 ntBASIC18.17■□□□□ 0.5
TAF4O00268 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.17■□□□□ 0.5
TAF4O00268 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 HLA-A-201ENST00000376802 1334 ntBASIC18.17■□□□□ 0.5
TAF4O00268 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TAF4O00268 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TAF4O00268 AC093503.3-201ENST00000624917 2352 ntBASIC18.17■□□□□ 0.5
TAF4O00268 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TAF4O00268 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.17■□□□□ 0.5
TAF4O00268 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TAF4O00268 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
TAF4O00268 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TAF4O00268 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TAF4O00268 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.16■□□□□ 0.5
TAF4O00268 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.16■□□□□ 0.5
TAF4O00268 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.16■□□□□ 0.5
TAF4O00268 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.16■□□□□ 0.5
TAF4O00268 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.16■□□□□ 0.5
TAF4O00268 AF228730.7-201ENST00000641842 219 ntBASIC18.16■□□□□ 0.5
TAF4O00268 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.16■□□□□ 0.5
TAF4O00268 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.16■□□□□ 0.5
TAF4O00268 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TAF4O00268 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TAF4O00268 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.16■□□□□ 0.5
TAF4O00268 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TAF4O00268 FZD10-202ENST00000539839 3282 ntBASIC18.15■□□□□ 0.5
TAF4O00268 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 PMS2P1-201ENST00000431037 1228 ntBASIC18.15■□□□□ 0.5
TAF4O00268 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.15■□□□□ 0.5
TAF4O00268 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms