Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 OR7E14P-202ENST00000530490 1290 ntBASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 MIR3180-4-201ENST00000582223 153 ntBASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.7■□□□□ 0.26
COL6A6A6NMZ7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 AL109659.2-201ENST00000606809 1674 ntBASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 AC009237.14-201ENST00000609975 1594 ntBASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 AC073314.1-201ENST00000568729 2216 ntBASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 AC092667.1-201ENST00000434301 2586 ntBASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL6A6A6NMZ7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 AC009533.2-201ENST00000543664 586 ntBASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL6A6A6NMZ7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL6A6A6NMZ7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms