Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 NAPSB-206ENST00000562112 1266 ntBASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 AC067852.2-201ENST00000590513 2313 ntBASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRAMEF25A6NGN4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF25A6NGN4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 CYP2D8P-201ENST00000433633 1490 ntBASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF25A6NGN4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 AC068587.9-201ENST00000641814 219 ntBASIC17.41■□□□□ 0.38
PRAMEF25A6NGN4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms