Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RCCD1A6NED2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCCD1A6NED2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCCD1A6NED2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCCD1A6NED2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RCCD1A6NED2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCCD1A6NED2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RCCD1A6NED2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RCCD1A6NED2 SLC25A6P5-201ENST00000435663 894 ntBASIC19.77■□□□□ 0.76
RCCD1A6NED2 AC133681.1-201ENST00000465482 601 ntBASIC19.77■□□□□ 0.76
RCCD1A6NED2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 AC008622.2-201ENST00000617006 1229 ntBASIC19.77■□□□□ 0.76
RCCD1A6NED2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.77■□□□□ 0.76
RCCD1A6NED2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.77■□□□□ 0.75
RCCD1A6NED2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.77■□□□□ 0.75
RCCD1A6NED2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RCCD1A6NED2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RCCD1A6NED2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RCCD1A6NED2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RCCD1A6NED2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RCCD1A6NED2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 KRT18P41-201ENST00000518924 1277 ntBASIC19.76■□□□□ 0.75
RCCD1A6NED2 CKBP1-201ENST00000565489 1086 ntBASIC19.76■□□□□ 0.75
RCCD1A6NED2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.76■□□□□ 0.75
RCCD1A6NED2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RCCD1A6NED2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.75■□□□□ 0.75
RCCD1A6NED2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.75■□□□□ 0.75
RCCD1A6NED2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 ID1-201ENST00000376105 1233 ntBASIC19.75■□□□□ 0.75
RCCD1A6NED2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 AC004951.3-201ENST00000418645 1148 ntBASIC19.75■□□□□ 0.75
RCCD1A6NED2 HLA-L-209ENST00000420110 1011 ntBASIC19.75■□□□□ 0.75
RCCD1A6NED2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RCCD1A6NED2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RCCD1A6NED2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.75■□□□□ 0.75
RCCD1A6NED2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.75■□□□□ 0.75
RCCD1A6NED2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms