Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 AC084018.2-201ENST00000613093 2607 ntBASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 ZNRF2P3-201ENST00000424200 374 ntBASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRDV1A0A1B0GX56 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 AD000864.1-201ENST00000624076 2295 ntBASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 BX276092.2-201ENST00000417668 665 ntBASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRDV1A0A1B0GX56 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRDV1A0A1B0GX56 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRDV1A0A1B0GX56 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRDV1A0A1B0GX56 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRDV1A0A1B0GX56 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRDV1A0A1B0GX56 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRDV1A0A1B0GX56 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRDV1A0A1B0GX56 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 HLA-A-209ENST00000638375 975 ntBASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 KRT8P41-201ENST00000533985 1514 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms