Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV26-1A0A087WT03 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 UNC93B2-201ENST00000285383 730 ntBASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 FAM207BP-201ENST00000447172 505 ntBASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 AC011506.1-201ENST00000474329 610 ntBASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 AC116562.2-201ENST00000507042 360 ntBASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV26-1A0A087WT03 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 AL355075.4-201ENST00000554988 638 ntBASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV26-1A0A087WT03 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 AC116562.4-201ENST00000641316 2276 ntBASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRAV26-1A0A087WT03 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV26-1A0A087WT03 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV26-1A0A087WT03 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
TRAV26-1A0A087WT03 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV26-1A0A087WT03 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV26-1A0A087WT03 KRT8P41-201ENST00000533985 1514 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms